Protein–RNA interactions for Protein: Q8BW22

Ss18l1, Calcium-responsive transactivator, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18l1Q8BW22 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ss18l1Q8BW22 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.3■□□□□ 0.84
Ss18l1Q8BW22 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ss18l1Q8BW22 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ss18l1Q8BW22 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ss18l1Q8BW22 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ss18l1Q8BW22 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ss18l1Q8BW22 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.27■□□□□ 0.84
Ss18l1Q8BW22 Gm45444-201ENSMUST00000211394 898 ntBASIC20.27■□□□□ 0.84
Ss18l1Q8BW22 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ss18l1Q8BW22 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ss18l1Q8BW22 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ss18l1Q8BW22 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ss18l1Q8BW22 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Ss18l1Q8BW22 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ss18l1Q8BW22 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ss18l1Q8BW22 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.26■□□□□ 0.83
Ss18l1Q8BW22 Gm15820-201ENSMUST00000201566 728 ntBASIC20.26■□□□□ 0.83
Ss18l1Q8BW22 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.26■□□□□ 0.83
Ss18l1Q8BW22 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ss18l1Q8BW22 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ss18l1Q8BW22 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ss18l1Q8BW22 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.24■□□□□ 0.83
Ss18l1Q8BW22 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ss18l1Q8BW22 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ss18l1Q8BW22 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ss18l1Q8BW22 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.23■□□□□ 0.83
Ss18l1Q8BW22 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ss18l1Q8BW22 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.22■□□□□ 0.83
Ss18l1Q8BW22 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ss18l1Q8BW22 Rps24-207ENSMUST00000224568 714 ntBASIC20.22■□□□□ 0.83
Ss18l1Q8BW22 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.22■□□□□ 0.83
Ss18l1Q8BW22 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ss18l1Q8BW22 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ss18l1Q8BW22 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ss18l1Q8BW22 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.21■□□□□ 0.83
Ss18l1Q8BW22 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ss18l1Q8BW22 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ss18l1Q8BW22 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.2■□□□□ 0.82
Ss18l1Q8BW22 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ss18l1Q8BW22 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.2■□□□□ 0.82
Ss18l1Q8BW22 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ss18l1Q8BW22 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.2■□□□□ 0.82
Ss18l1Q8BW22 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ss18l1Q8BW22 Gm45102-201ENSMUST00000207427 857 ntBASIC20.19■□□□□ 0.82
Ss18l1Q8BW22 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ss18l1Q8BW22 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ss18l1Q8BW22 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ss18l1Q8BW22 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.18■□□□□ 0.82
Ss18l1Q8BW22 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ss18l1Q8BW22 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ss18l1Q8BW22 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.17■□□□□ 0.82
Ss18l1Q8BW22 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ss18l1Q8BW22 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ss18l1Q8BW22 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.17■□□□□ 0.82
Ss18l1Q8BW22 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ss18l1Q8BW22 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ss18l1Q8BW22 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ss18l1Q8BW22 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ss18l1Q8BW22 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ss18l1Q8BW22 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.16■□□□□ 0.82
Ss18l1Q8BW22 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ss18l1Q8BW22 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.15■□□□□ 0.82
Ss18l1Q8BW22 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ss18l1Q8BW22 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ss18l1Q8BW22 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.14■□□□□ 0.81
Ss18l1Q8BW22 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ss18l1Q8BW22 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Ss18l1Q8BW22 Gm14117-201ENSMUST00000122417 843 ntBASIC20.14■□□□□ 0.81
Ss18l1Q8BW22 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ss18l1Q8BW22 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ss18l1Q8BW22 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ss18l1Q8BW22 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ss18l1Q8BW22 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ss18l1Q8BW22 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ss18l1Q8BW22 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ss18l1Q8BW22 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ss18l1Q8BW22 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ss18l1Q8BW22 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ss18l1Q8BW22 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ss18l1Q8BW22 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ss18l1Q8BW22 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ss18l1Q8BW22 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 317.1 ms