Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30,61■■■□□ 2,49
Col16a1Q8BLX7 Gm45102-201ENSMUST00000207427 857 ntBASIC30,6■■■□□ 2,49
Col16a1Q8BLX7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC30,6■■■□□ 2,49
Col16a1Q8BLX7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Col16a1Q8BLX7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC30,6■■■□□ 2,49
Col16a1Q8BLX7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Col16a1Q8BLX7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30,58■■■□□ 2,49
Col16a1Q8BLX7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC30,58■■■□□ 2,49
Col16a1Q8BLX7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30,58■■■□□ 2,49
Col16a1Q8BLX7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Col16a1Q8BLX7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Col16a1Q8BLX7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC30,57■■■□□ 2,48
Col16a1Q8BLX7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Col16a1Q8BLX7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC30,57■■■□□ 2,48
Col16a1Q8BLX7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Col16a1Q8BLX7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC30,56■■■□□ 2,48
Col16a1Q8BLX7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC30,55■■■□□ 2,48
Col16a1Q8BLX7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC30,55■■■□□ 2,48
Col16a1Q8BLX7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Col16a1Q8BLX7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC30,54■■■□□ 2,48
Col16a1Q8BLX7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC30,54■■■□□ 2,48
Col16a1Q8BLX7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC30,54■■■□□ 2,48
Col16a1Q8BLX7 Gm14117-201ENSMUST00000122417 843 ntBASIC30,53■■■□□ 2,48
Col16a1Q8BLX7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30,51■■■□□ 2,48
Col16a1Q8BLX7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC30,51■■■□□ 2,47
Col16a1Q8BLX7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC30,51■■■□□ 2,47
Col16a1Q8BLX7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC30,5■■■□□ 2,47
Col16a1Q8BLX7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC30,5■■■□□ 2,47
Col16a1Q8BLX7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC30,49■■■□□ 2,47
Col16a1Q8BLX7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC30,49■■■□□ 2,47
Col16a1Q8BLX7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC30,49■■■□□ 2,47
Col16a1Q8BLX7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC30,49■■■□□ 2,47
Col16a1Q8BLX7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Col16a1Q8BLX7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Col16a1Q8BLX7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC30,48■■■□□ 2,47
Col16a1Q8BLX7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC30,48■■■□□ 2,47
Col16a1Q8BLX7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC30,48■■■□□ 2,47
Col16a1Q8BLX7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Col16a1Q8BLX7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30,48■■■□□ 2,47
Col16a1Q8BLX7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Col16a1Q8BLX7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Col16a1Q8BLX7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC30,46■■■□□ 2,47
Col16a1Q8BLX7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Col16a1Q8BLX7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC30,46■■■□□ 2,47
Col16a1Q8BLX7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC30,45■■■□□ 2,47
Col16a1Q8BLX7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC30,45■■■□□ 2,47
Col16a1Q8BLX7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC30,45■■■□□ 2,47
Col16a1Q8BLX7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC30,45■■■□□ 2,47
Col16a1Q8BLX7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Col16a1Q8BLX7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Col16a1Q8BLX7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC30,43■■■□□ 2,46
Col16a1Q8BLX7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Col16a1Q8BLX7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Col16a1Q8BLX7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC30,42■■■□□ 2,46
Col16a1Q8BLX7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Col16a1Q8BLX7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Col16a1Q8BLX7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Col16a1Q8BLX7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC30,41■■■□□ 2,46
Col16a1Q8BLX7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30,41■■■□□ 2,46
Col16a1Q8BLX7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30,4■■■□□ 2,46
Col16a1Q8BLX7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30,4■■■□□ 2,46
Col16a1Q8BLX7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC30,4■■■□□ 2,46
Col16a1Q8BLX7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC30,4■■■□□ 2,46
Col16a1Q8BLX7 Gm9959-201ENSMUST00000068277 390 ntBASIC30,4■■■□□ 2,46
Col16a1Q8BLX7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Col16a1Q8BLX7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Col16a1Q8BLX7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Col16a1Q8BLX7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC30,39■■■□□ 2,46
Col16a1Q8BLX7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Col16a1Q8BLX7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,45
Col16a1Q8BLX7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC30,38■■■□□ 2,45
Col16a1Q8BLX7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Col16a1Q8BLX7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Col16a1Q8BLX7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC30,36■■■□□ 2,45
Col16a1Q8BLX7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC30,36■■■□□ 2,45
Col16a1Q8BLX7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,36■■■□□ 2,45
Col16a1Q8BLX7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC30,35■■■□□ 2,45
Col16a1Q8BLX7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30,35■■■□□ 2,45
Col16a1Q8BLX7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC30,33■■■□□ 2,45
Col16a1Q8BLX7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC30,33■■■□□ 2,45
Col16a1Q8BLX7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30,33■■■□□ 2,45
Col16a1Q8BLX7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC30,33■■■□□ 2,45
Col16a1Q8BLX7 Gm42501-201ENSMUST00000200220 1026 ntBASIC30,32■■■□□ 2,45
Col16a1Q8BLX7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,45
Col16a1Q8BLX7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Col16a1Q8BLX7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC30,32■■■□□ 2,44
Col16a1Q8BLX7 Fezf2-202ENSMUST00000224023 1917 ntBASIC30,32■■■□□ 2,44
Col16a1Q8BLX7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Col16a1Q8BLX7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30,31■■■□□ 2,44
Col16a1Q8BLX7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC30,31■■■□□ 2,44
Col16a1Q8BLX7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Col16a1Q8BLX7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Col16a1Q8BLX7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30,29■■■□□ 2,44
Col16a1Q8BLX7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Col16a1Q8BLX7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Col16a1Q8BLX7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC30,29■■■□□ 2,44
Col16a1Q8BLX7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC30,29■■■□□ 2,44
Col16a1Q8BLX7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30,28■■■□□ 2,44
Col16a1Q8BLX7 Gm18755-201ENSMUST00000218030 1099 ntBASIC30,28■■■□□ 2,44
Col16a1Q8BLX7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Retrieved 100 of 76,532 protein–RNA pairs in 31,8 ms