Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.3■■□□□ 1.8
Ddx55Q6ZPL9 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.3■■□□□ 1.8
Ddx55Q6ZPL9 Gm45102-201ENSMUST00000207427 857 ntBASIC26.29■■□□□ 1.8
Ddx55Q6ZPL9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ddx55Q6ZPL9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Ddx55Q6ZPL9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ddx55Q6ZPL9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Ddx55Q6ZPL9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ddx55Q6ZPL9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ddx55Q6ZPL9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ddx55Q6ZPL9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.27■■□□□ 1.8
Ddx55Q6ZPL9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.27■■□□□ 1.8
Ddx55Q6ZPL9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ddx55Q6ZPL9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ddx55Q6ZPL9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.27■■□□□ 1.8
Ddx55Q6ZPL9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ddx55Q6ZPL9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ddx55Q6ZPL9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.26■■□□□ 1.79
Ddx55Q6ZPL9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx55Q6ZPL9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx55Q6ZPL9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Ddx55Q6ZPL9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx55Q6ZPL9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx55Q6ZPL9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx55Q6ZPL9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.24■■□□□ 1.79
Ddx55Q6ZPL9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.24■■□□□ 1.79
Ddx55Q6ZPL9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx55Q6ZPL9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx55Q6ZPL9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
Ddx55Q6ZPL9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Ddx55Q6ZPL9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx55Q6ZPL9 Gm14117-201ENSMUST00000122417 843 ntBASIC26.22■■□□□ 1.79
Ddx55Q6ZPL9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx55Q6ZPL9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx55Q6ZPL9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Ddx55Q6ZPL9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx55Q6ZPL9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx55Q6ZPL9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx55Q6ZPL9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx55Q6ZPL9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx55Q6ZPL9 Amer2-203ENSMUST00000225247 2662 ntBASIC26.2■■□□□ 1.78
Ddx55Q6ZPL9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
Ddx55Q6ZPL9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx55Q6ZPL9 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.19■■□□□ 1.78
Ddx55Q6ZPL9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.19■■□□□ 1.78
Ddx55Q6ZPL9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx55Q6ZPL9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Ddx55Q6ZPL9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx55Q6ZPL9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ddx55Q6ZPL9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx55Q6ZPL9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx55Q6ZPL9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx55Q6ZPL9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx55Q6ZPL9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ddx55Q6ZPL9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx55Q6ZPL9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx55Q6ZPL9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.16■■□□□ 1.78
Ddx55Q6ZPL9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx55Q6ZPL9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx55Q6ZPL9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Ddx55Q6ZPL9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx55Q6ZPL9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx55Q6ZPL9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx55Q6ZPL9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.15■■□□□ 1.78
Ddx55Q6ZPL9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx55Q6ZPL9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.14■■□□□ 1.78
Ddx55Q6ZPL9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Ddx55Q6ZPL9 Gm9959-201ENSMUST00000068277 390 ntBASIC26.14■■□□□ 1.78
Ddx55Q6ZPL9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ddx55Q6ZPL9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Ddx55Q6ZPL9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx55Q6ZPL9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx55Q6ZPL9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.12■■□□□ 1.77
Ddx55Q6ZPL9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.12■■□□□ 1.77
Ddx55Q6ZPL9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx55Q6ZPL9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.12■■□□□ 1.77
Ddx55Q6ZPL9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Ddx55Q6ZPL9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Ddx55Q6ZPL9 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.11■■□□□ 1.77
Ddx55Q6ZPL9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx55Q6ZPL9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx55Q6ZPL9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx55Q6ZPL9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Ddx55Q6ZPL9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx55Q6ZPL9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.09■■□□□ 1.77
Ddx55Q6ZPL9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx55Q6ZPL9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.08■■□□□ 1.77
Ddx55Q6ZPL9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx55Q6ZPL9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx55Q6ZPL9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx55Q6ZPL9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Ddx55Q6ZPL9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx55Q6ZPL9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.07■■□□□ 1.76
Ddx55Q6ZPL9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx55Q6ZPL9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx55Q6ZPL9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.07■■□□□ 1.76
Ddx55Q6ZPL9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Ddx55Q6ZPL9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx55Q6ZPL9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx55Q6ZPL9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms