Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Clcn4Q61418 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn4Q61418 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn4Q61418 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn4Q61418 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn4Q61418 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn4Q61418 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn4Q61418 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Clcn4Q61418 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcn4Q61418 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clcn4Q61418 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn4Q61418 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn4Q61418 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn4Q61418 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn4Q61418 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn4Q61418 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn4Q61418 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Clcn4Q61418 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn4Q61418 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.47■□□□□ 0.87
Clcn4Q61418 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn4Q61418 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn4Q61418 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn4Q61418 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn4Q61418 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn4Q61418 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn4Q61418 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.46■□□□□ 0.87
Clcn4Q61418 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Clcn4Q61418 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn4Q61418 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.46■□□□□ 0.87
Clcn4Q61418 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn4Q61418 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn4Q61418 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Clcn4Q61418 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn4Q61418 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn4Q61418 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn4Q61418 Mir6538-201ENSMUST00000183713 110 ntBASIC20.45■□□□□ 0.86
Clcn4Q61418 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn4Q61418 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn4Q61418 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn4Q61418 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn4Q61418 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn4Q61418 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn4Q61418 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn4Q61418 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn4Q61418 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn4Q61418 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn4Q61418 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn4Q61418 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.43■□□□□ 0.86
Clcn4Q61418 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn4Q61418 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn4Q61418 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.43■□□□□ 0.86
Clcn4Q61418 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.43■□□□□ 0.86
Clcn4Q61418 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Clcn4Q61418 Gm6311-201ENSMUST00000073790 878 ntBASIC20.42■□□□□ 0.86
Clcn4Q61418 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.42■□□□□ 0.86
Clcn4Q61418 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn4Q61418 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Clcn4Q61418 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn4Q61418 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn4Q61418 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Clcn4Q61418 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Clcn4Q61418 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn4Q61418 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.4■□□□□ 0.86
Clcn4Q61418 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn4Q61418 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Clcn4Q61418 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn4Q61418 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.39■□□□□ 0.85
Clcn4Q61418 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn4Q61418 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn4Q61418 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Clcn4Q61418 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Clcn4Q61418 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn4Q61418 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn4Q61418 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn4Q61418 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn4Q61418 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Clcn4Q61418 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn4Q61418 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn4Q61418 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn4Q61418 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn4Q61418 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.35■□□□□ 0.85
Clcn4Q61418 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn4Q61418 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn4Q61418 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Clcn4Q61418 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Clcn4Q61418 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn4Q61418 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn4Q61418 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn4Q61418 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn4Q61418 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Clcn4Q61418 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn4Q61418 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms