Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Trav2Q5R1I9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav2Q5R1I9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.91■□□□□ 0.46
Trav2Q5R1I9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav2Q5R1I9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav2Q5R1I9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav2Q5R1I9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav2Q5R1I9 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.9■□□□□ 0.46
Trav2Q5R1I9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav2Q5R1I9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav2Q5R1I9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.9■□□□□ 0.46
Trav2Q5R1I9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav2Q5R1I9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav2Q5R1I9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.89■□□□□ 0.45
Trav2Q5R1I9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav2Q5R1I9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav2Q5R1I9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav2Q5R1I9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav2Q5R1I9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav2Q5R1I9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav2Q5R1I9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav2Q5R1I9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav2Q5R1I9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav2Q5R1I9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav2Q5R1I9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Trav2Q5R1I9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav2Q5R1I9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.87■□□□□ 0.45
Trav2Q5R1I9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav2Q5R1I9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav2Q5R1I9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav2Q5R1I9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav2Q5R1I9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav2Q5R1I9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav2Q5R1I9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav2Q5R1I9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav2Q5R1I9 Gm10420-201ENSMUST00000121713 882 ntBASIC17.86■□□□□ 0.45
Trav2Q5R1I9 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.86■□□□□ 0.45
Trav2Q5R1I9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav2Q5R1I9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav2Q5R1I9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav2Q5R1I9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav2Q5R1I9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav2Q5R1I9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav2Q5R1I9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav2Q5R1I9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav2Q5R1I9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav2Q5R1I9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav2Q5R1I9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.84■□□□□ 0.45
Trav2Q5R1I9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav2Q5R1I9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav2Q5R1I9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav2Q5R1I9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav2Q5R1I9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav2Q5R1I9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav2Q5R1I9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav2Q5R1I9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.81■□□□□ 0.44
Trav2Q5R1I9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav2Q5R1I9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav2Q5R1I9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav2Q5R1I9 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.81■□□□□ 0.44
Trav2Q5R1I9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav2Q5R1I9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav2Q5R1I9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav2Q5R1I9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav2Q5R1I9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav2Q5R1I9 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.8■□□□□ 0.44
Trav2Q5R1I9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav2Q5R1I9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav2Q5R1I9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav2Q5R1I9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav2Q5R1I9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav2Q5R1I9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav2Q5R1I9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav2Q5R1I9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav2Q5R1I9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav2Q5R1I9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav2Q5R1I9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav2Q5R1I9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav2Q5R1I9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav2Q5R1I9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav2Q5R1I9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav2Q5R1I9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav2Q5R1I9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav2Q5R1I9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav2Q5R1I9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav2Q5R1I9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav2Q5R1I9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav2Q5R1I9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav2Q5R1I9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav2Q5R1I9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav2Q5R1I9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trav2Q5R1I9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms