Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8d-1Q5R1H8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8d-1Q5R1H8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8d-1Q5R1H8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8d-1Q5R1H8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8d-1Q5R1H8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8d-1Q5R1H8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8d-1Q5R1H8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8d-1Q5R1H8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8d-1Q5R1H8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8d-1Q5R1H8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8d-1Q5R1H8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8d-1Q5R1H8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8d-1Q5R1H8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8d-1Q5R1H8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav8d-1Q5R1H8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav8d-1Q5R1H8 Nkain2-201ENSMUST00000092602 558 ntBASIC18.27■□□□□ 0.52
Trav8d-1Q5R1H8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav8d-1Q5R1H8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav8d-1Q5R1H8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav8d-1Q5R1H8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav8d-1Q5R1H8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8d-1Q5R1H8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Trav8d-1Q5R1H8 Gm8503-201ENSMUST00000118131 455 ntBASIC18.24■□□□□ 0.51
Trav8d-1Q5R1H8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8d-1Q5R1H8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8d-1Q5R1H8 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-1Q5R1H8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav8d-1Q5R1H8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-1Q5R1H8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-1Q5R1H8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-1Q5R1H8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav8d-1Q5R1H8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.21■□□□□ 0.5
Trav8d-1Q5R1H8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trav8d-1Q5R1H8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav8d-1Q5R1H8 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.2■□□□□ 0.5
Trav8d-1Q5R1H8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-1Q5R1H8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trav8d-1Q5R1H8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-1Q5R1H8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-1Q5R1H8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-1Q5R1H8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-1Q5R1H8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.15■□□□□ 0.5
Trav8d-1Q5R1H8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav8d-1Q5R1H8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-1Q5R1H8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-1Q5R1H8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-1Q5R1H8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-1Q5R1H8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-1Q5R1H8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms