Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tnrc6aQ3UHK8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.26■□□□□ 0.99
Tnrc6aQ3UHK8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnrc6aQ3UHK8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.25■□□□□ 0.99
Tnrc6aQ3UHK8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tnrc6aQ3UHK8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.24■□□□□ 0.99
Tnrc6aQ3UHK8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnrc6aQ3UHK8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnrc6aQ3UHK8 Gm43566-201ENSMUST00000196851 808 ntBASIC21.24■□□□□ 0.99
Tnrc6aQ3UHK8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnrc6aQ3UHK8 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.23■□□□□ 0.99
Tnrc6aQ3UHK8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnrc6aQ3UHK8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnrc6aQ3UHK8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Tnrc6aQ3UHK8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc6aQ3UHK8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc6aQ3UHK8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc6aQ3UHK8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tnrc6aQ3UHK8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tnrc6aQ3UHK8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc6aQ3UHK8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc6aQ3UHK8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tnrc6aQ3UHK8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.21■□□□□ 0.99
Tnrc6aQ3UHK8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tnrc6aQ3UHK8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnrc6aQ3UHK8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.2■□□□□ 0.98
Tnrc6aQ3UHK8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Tnrc6aQ3UHK8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc6aQ3UHK8 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.18■□□□□ 0.98
Tnrc6aQ3UHK8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tnrc6aQ3UHK8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnrc6aQ3UHK8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.18■□□□□ 0.98
Tnrc6aQ3UHK8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnrc6aQ3UHK8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnrc6aQ3UHK8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Tnrc6aQ3UHK8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnrc6aQ3UHK8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tnrc6aQ3UHK8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.17■□□□□ 0.98
Tnrc6aQ3UHK8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Tnrc6aQ3UHK8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tnrc6aQ3UHK8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
Tnrc6aQ3UHK8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Tnrc6aQ3UHK8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Tnrc6aQ3UHK8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnrc6aQ3UHK8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Tnrc6aQ3UHK8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnrc6aQ3UHK8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.15■□□□□ 0.98
Tnrc6aQ3UHK8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tnrc6aQ3UHK8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.14■□□□□ 0.97
Tnrc6aQ3UHK8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnrc6aQ3UHK8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnrc6aQ3UHK8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnrc6aQ3UHK8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Tnrc6aQ3UHK8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnrc6aQ3UHK8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
Tnrc6aQ3UHK8 Gm15546-201ENSMUST00000122095 826 ntBASIC21.13■□□□□ 0.97
Tnrc6aQ3UHK8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnrc6aQ3UHK8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnrc6aQ3UHK8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnrc6aQ3UHK8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnrc6aQ3UHK8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnrc6aQ3UHK8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnrc6aQ3UHK8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Tnrc6aQ3UHK8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnrc6aQ3UHK8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.11■□□□□ 0.97
Tnrc6aQ3UHK8 Gm45444-201ENSMUST00000211394 898 ntBASIC21.11■□□□□ 0.97
Tnrc6aQ3UHK8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnrc6aQ3UHK8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tnrc6aQ3UHK8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Tnrc6aQ3UHK8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnrc6aQ3UHK8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tnrc6aQ3UHK8 Gm13238-201ENSMUST00000117655 780 ntBASIC21.09■□□□□ 0.97
Tnrc6aQ3UHK8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.09■□□□□ 0.97
Tnrc6aQ3UHK8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tnrc6aQ3UHK8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnrc6aQ3UHK8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnrc6aQ3UHK8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.07■□□□□ 0.96
Tnrc6aQ3UHK8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Tnrc6aQ3UHK8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnrc6aQ3UHK8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.06■□□□□ 0.96
Tnrc6aQ3UHK8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.06■□□□□ 0.96
Tnrc6aQ3UHK8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tnrc6aQ3UHK8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tnrc6aQ3UHK8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.05■□□□□ 0.96
Tnrc6aQ3UHK8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.05■□□□□ 0.96
Tnrc6aQ3UHK8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnrc6aQ3UHK8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnrc6aQ3UHK8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnrc6aQ3UHK8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnrc6aQ3UHK8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnrc6aQ3UHK8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnrc6aQ3UHK8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms