Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Gm9812-201ENSMUST00000061934 968 ntBASIC21.41■■□□□ 1.02
Xrra1Q3U3V8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Xrra1Q3U3V8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Xrra1Q3U3V8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Xrra1Q3U3V8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Xrra1Q3U3V8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Xrra1Q3U3V8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.4■■□□□ 1.02
Xrra1Q3U3V8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Xrra1Q3U3V8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Xrra1Q3U3V8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Xrra1Q3U3V8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Xrra1Q3U3V8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Xrra1Q3U3V8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Xrra1Q3U3V8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Xrra1Q3U3V8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Xrra1Q3U3V8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.39■■□□□ 1.01
Xrra1Q3U3V8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Xrra1Q3U3V8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.39■■□□□ 1.01
Xrra1Q3U3V8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Xrra1Q3U3V8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Xrra1Q3U3V8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Xrra1Q3U3V8 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.38■■□□□ 1.01
Xrra1Q3U3V8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Xrra1Q3U3V8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Xrra1Q3U3V8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Xrra1Q3U3V8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Xrra1Q3U3V8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Xrra1Q3U3V8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Xrra1Q3U3V8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Xrra1Q3U3V8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Xrra1Q3U3V8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Xrra1Q3U3V8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Xrra1Q3U3V8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Xrra1Q3U3V8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Xrra1Q3U3V8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.36■■□□□ 1.01
Xrra1Q3U3V8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Xrra1Q3U3V8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Xrra1Q3U3V8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Xrra1Q3U3V8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
Xrra1Q3U3V8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Xrra1Q3U3V8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Xrra1Q3U3V8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Xrra1Q3U3V8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Xrra1Q3U3V8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Xrra1Q3U3V8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Xrra1Q3U3V8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Xrra1Q3U3V8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Xrra1Q3U3V8 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.33■■□□□ 1.01
Xrra1Q3U3V8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Xrra1Q3U3V8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Xrra1Q3U3V8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.33■■□□□ 1
Xrra1Q3U3V8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Xrra1Q3U3V8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.32■■□□□ 1
Xrra1Q3U3V8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Xrra1Q3U3V8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Xrra1Q3U3V8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.31■■□□□ 1
Xrra1Q3U3V8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.31■■□□□ 1
Xrra1Q3U3V8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Xrra1Q3U3V8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.31■■□□□ 1
Xrra1Q3U3V8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Xrra1Q3U3V8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Xrra1Q3U3V8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.3■■□□□ 1
Xrra1Q3U3V8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.3■■□□□ 1
Xrra1Q3U3V8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Xrra1Q3U3V8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Xrra1Q3U3V8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Xrra1Q3U3V8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Xrra1Q3U3V8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Xrra1Q3U3V8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Xrra1Q3U3V8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Xrra1Q3U3V8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Xrra1Q3U3V8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Xrra1Q3U3V8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Xrra1Q3U3V8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.27■■□□□ 1
Xrra1Q3U3V8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.27■■□□□ 1
Xrra1Q3U3V8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Xrra1Q3U3V8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Xrra1Q3U3V8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.27■■□□□ 1
Xrra1Q3U3V8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Xrra1Q3U3V8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Xrra1Q3U3V8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Xrra1Q3U3V8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Xrra1Q3U3V8 Gm9806-201ENSMUST00000051080 552 ntBASIC21.26■□□□□ 0.99
Xrra1Q3U3V8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Xrra1Q3U3V8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Xrra1Q3U3V8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Xrra1Q3U3V8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrra1Q3U3V8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Xrra1Q3U3V8 Scarna2-201ENSMUST00000157560 414 ntBASIC21.25■□□□□ 0.99
Xrra1Q3U3V8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.25■□□□□ 0.99
Xrra1Q3U3V8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrra1Q3U3V8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrra1Q3U3V8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrra1Q3U3V8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrra1Q3U3V8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrra1Q3U3V8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Xrra1Q3U3V8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Xrra1Q3U3V8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrra1Q3U3V8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrra1Q3U3V8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms