Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad5P97454 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smad5P97454 Gm14523-201ENSMUST00000117260 558 ntBASIC21.18■□□□□ 0.98
Smad5P97454 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Smad5P97454 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad5P97454 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad5P97454 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Smad5P97454 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Smad5P97454 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Smad5P97454 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.17■□□□□ 0.98
Smad5P97454 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smad5P97454 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.17■□□□□ 0.98
Smad5P97454 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.17■□□□□ 0.98
Smad5P97454 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smad5P97454 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smad5P97454 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smad5P97454 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Smad5P97454 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad5P97454 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad5P97454 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad5P97454 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.16■□□□□ 0.98
Smad5P97454 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.16■□□□□ 0.98
Smad5P97454 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad5P97454 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad5P97454 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smad5P97454 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smad5P97454 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Smad5P97454 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad5P97454 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.14■□□□□ 0.97
Smad5P97454 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smad5P97454 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.14■□□□□ 0.97
Smad5P97454 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smad5P97454 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.14■□□□□ 0.97
Smad5P97454 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Smad5P97454 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad5P97454 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad5P97454 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smad5P97454 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smad5P97454 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad5P97454 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad5P97454 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad5P97454 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smad5P97454 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.12■□□□□ 0.97
Smad5P97454 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smad5P97454 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smad5P97454 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smad5P97454 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smad5P97454 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Smad5P97454 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad5P97454 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smad5P97454 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smad5P97454 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Smad5P97454 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smad5P97454 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smad5P97454 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smad5P97454 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smad5P97454 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Smad5P97454 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smad5P97454 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smad5P97454 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.08■□□□□ 0.97
Smad5P97454 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.08■□□□□ 0.97
Smad5P97454 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smad5P97454 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Smad5P97454 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smad5P97454 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smad5P97454 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Smad5P97454 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Smad5P97454 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Smad5P97454 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.06■□□□□ 0.96
Smad5P97454 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smad5P97454 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.05■□□□□ 0.96
Smad5P97454 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smad5P97454 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.04■□□□□ 0.96
Smad5P97454 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smad5P97454 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smad5P97454 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Smad5P97454 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smad5P97454 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.02■□□□□ 0.96
Smad5P97454 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.02■□□□□ 0.96
Smad5P97454 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.02■□□□□ 0.96
Smad5P97454 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smad5P97454 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smad5P97454 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.02■□□□□ 0.96
Smad5P97454 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smad5P97454 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Smad5P97454 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smad5P97454 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.01■□□□□ 0.95
Smad5P97454 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smad5P97454 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Smad5P97454 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Smad5P97454 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smad5P97454 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smad5P97454 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21■□□□□ 0.95
Smad5P97454 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Smad5P97454 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smad5P97454 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smad5P97454 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smad5P97454 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smad5P97454 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smad5P97454 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms