Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Hnf4aP49698 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hnf4aP49698 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Hnf4aP49698 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Hnf4aP49698 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hnf4aP49698 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Hnf4aP49698 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hnf4aP49698 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Hnf4aP49698 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hnf4aP49698 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Hnf4aP49698 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.67■■□□□ 1.06
Hnf4aP49698 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.67■■□□□ 1.06
Hnf4aP49698 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hnf4aP49698 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
Hnf4aP49698 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.66■■□□□ 1.06
Hnf4aP49698 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hnf4aP49698 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hnf4aP49698 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hnf4aP49698 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.65■■□□□ 1.06
Hnf4aP49698 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hnf4aP49698 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hnf4aP49698 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.65■■□□□ 1.06
Hnf4aP49698 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hnf4aP49698 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hnf4aP49698 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hnf4aP49698 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hnf4aP49698 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.64■■□□□ 1.06
Hnf4aP49698 Gm45364-201ENSMUST00000210883 159 ntBASIC21.64■■□□□ 1.05
Hnf4aP49698 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.63■■□□□ 1.05
Hnf4aP49698 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.63■■□□□ 1.05
Hnf4aP49698 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hnf4aP49698 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hnf4aP49698 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hnf4aP49698 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hnf4aP49698 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Hnf4aP49698 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.63■■□□□ 1.05
Hnf4aP49698 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hnf4aP49698 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hnf4aP49698 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hnf4aP49698 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.62■■□□□ 1.05
Hnf4aP49698 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hnf4aP49698 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.61■■□□□ 1.05
Hnf4aP49698 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hnf4aP49698 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hnf4aP49698 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hnf4aP49698 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hnf4aP49698 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.6■■□□□ 1.05
Hnf4aP49698 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hnf4aP49698 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hnf4aP49698 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hnf4aP49698 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.59■■□□□ 1.05
Hnf4aP49698 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hnf4aP49698 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hnf4aP49698 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hnf4aP49698 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hnf4aP49698 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hnf4aP49698 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hnf4aP49698 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hnf4aP49698 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.56■■□□□ 1.04
Hnf4aP49698 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hnf4aP49698 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.55■■□□□ 1.04
Hnf4aP49698 Terc-201ENSMUST00000082862 423 ntBASIC21.55■■□□□ 1.04
Hnf4aP49698 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hnf4aP49698 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hnf4aP49698 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Hnf4aP49698 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hnf4aP49698 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hnf4aP49698 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hnf4aP49698 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hnf4aP49698 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hnf4aP49698 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.52■■□□□ 1.04
Hnf4aP49698 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hnf4aP49698 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.52■■□□□ 1.04
Hnf4aP49698 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Hnf4aP49698 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hnf4aP49698 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hnf4aP49698 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.51■■□□□ 1.03
Hnf4aP49698 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hnf4aP49698 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hnf4aP49698 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Hnf4aP49698 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.5■■□□□ 1.03
Hnf4aP49698 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.5■■□□□ 1.03
Hnf4aP49698 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.5■■□□□ 1.03
Hnf4aP49698 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hnf4aP49698 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hnf4aP49698 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hnf4aP49698 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.49■■□□□ 1.03
Hnf4aP49698 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hnf4aP49698 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hnf4aP49698 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hnf4aP49698 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hnf4aP49698 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hnf4aP49698 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hnf4aP49698 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.48■■□□□ 1.03
Hnf4aP49698 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hnf4aP49698 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hnf4aP49698 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hnf4aP49698 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Hnf4aP49698 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.47■■□□□ 1.03
Hnf4aP49698 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms