Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sox18P43680 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox18P43680 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sox18P43680 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.76■■□□□ 1.07
Sox18P43680 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Sox18P43680 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox18P43680 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox18P43680 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.76■■□□□ 1.07
Sox18P43680 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sox18P43680 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox18P43680 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sox18P43680 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox18P43680 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox18P43680 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.74■■□□□ 1.07
Sox18P43680 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox18P43680 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.74■■□□□ 1.07
Sox18P43680 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox18P43680 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Sox18P43680 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox18P43680 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox18P43680 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox18P43680 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox18P43680 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.72■■□□□ 1.07
Sox18P43680 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox18P43680 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox18P43680 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox18P43680 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox18P43680 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox18P43680 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox18P43680 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox18P43680 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sox18P43680 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Sox18P43680 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sox18P43680 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox18P43680 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sox18P43680 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox18P43680 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox18P43680 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sox18P43680 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.66■■□□□ 1.06
Sox18P43680 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox18P43680 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.66■■□□□ 1.06
Sox18P43680 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sox18P43680 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox18P43680 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sox18P43680 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sox18P43680 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.64■■□□□ 1.05
Sox18P43680 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.64■■□□□ 1.05
Sox18P43680 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sox18P43680 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sox18P43680 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox18P43680 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.63■■□□□ 1.05
Sox18P43680 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox18P43680 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.63■■□□□ 1.05
Sox18P43680 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox18P43680 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox18P43680 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.63■■□□□ 1.05
Sox18P43680 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox18P43680 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox18P43680 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.62■■□□□ 1.05
Sox18P43680 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox18P43680 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox18P43680 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox18P43680 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox18P43680 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox18P43680 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sox18P43680 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Sox18P43680 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox18P43680 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox18P43680 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.6■■□□□ 1.05
Sox18P43680 Etf1-202ENSMUST00000180351 108 ntBASIC21.6■■□□□ 1.05
Sox18P43680 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.6■■□□□ 1.05
Sox18P43680 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox18P43680 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.59■■□□□ 1.05
Sox18P43680 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox18P43680 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Sox18P43680 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox18P43680 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sox18P43680 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sox18P43680 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox18P43680 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox18P43680 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Sox18P43680 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox18P43680 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox18P43680 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox18P43680 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox18P43680 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox18P43680 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox18P43680 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox18P43680 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox18P43680 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox18P43680 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox18P43680 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.55■■□□□ 1.04
Sox18P43680 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox18P43680 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox18P43680 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox18P43680 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox18P43680 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox18P43680 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox18P43680 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox18P43680 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms