Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 BNA3YJL060W 1335 nt9.67□□□□□ -0.86
SSM4P40318 MHP1YJL042W 4197 nt9.67□□□□□ -0.86
SSM4P40318 GAL83YER027C 1254 nt9.66□□□□□ -0.86
SSM4P40318 HEM2YGL040C 1029 nt9.66□□□□□ -0.86
SSM4P40318 YKR045CYKR045C 552 nt9.66□□□□□ -0.86
SSM4P40318 MET30YIL046W 1923 nt9.66□□□□□ -0.86
SSM4P40318 LAS17YOR181W 1902 nt9.66□□□□□ -0.86
SSM4P40318 ERS1YCR075C 783 nt9.65□□□□□ -0.86
SSM4P40318 TAF9YMR236W 474 nt9.65□□□□□ -0.86
SSM4P40318 GPD2YOL059W 1323 nt9.65□□□□□ -0.86
SSM4P40318 IMG1YCR046C 510 nt9.64□□□□□ -0.87
SSM4P40318 YSC83YHR017W 1158 nt9.63□□□□□ -0.87
SSM4P40318 DID2YKR035W-A 615 nt9.63□□□□□ -0.87
SSM4P40318 MRPS18YNL306W 654 nt9.63□□□□□ -0.87
SSM4P40318 PAB1YER165W 1734 nt9.63□□□□□ -0.87
SSM4P40318 YIL177CYIL177C 5277 nt9.63□□□□□ -0.87
SSM4P40318 FMO1YHR176W 1299 nt9.62□□□□□ -0.87
SSM4P40318 YKL018C-AYKL018C-A 300 nt9.62□□□□□ -0.87
SSM4P40318 POB3YML069W 1659 nt9.62□□□□□ -0.87
SSM4P40318 AMN1YBR158W 1650 nt9.62□□□□□ -0.87
SSM4P40318 RGD2YFL047W 2145 nt9.61□□□□□ -0.87
SSM4P40318 BSP1YPR171W 1731 nt9.61□□□□□ -0.87
SSM4P40318 AIM2YAL049C 741 nt9.6□□□□□ -0.87
SSM4P40318 TSR2YLR435W 618 nt9.59□□□□□ -0.87
SSM4P40318 COQ1YBR003W 1422 nt9.59□□□□□ -0.87
SSM4P40318 MTR3YGR158C 753 nt9.58□□□□□ -0.88
SSM4P40318 YLR184WYLR184W 348 nt9.58□□□□□ -0.88
SSM4P40318 YLR361C-AYLR361C-A 297 nt9.58□□□□□ -0.88
SSM4P40318 RFS1YBR052C 633 nt9.58□□□□□ -0.88
SSM4P40318 STT3YGL022W 2157 nt9.58□□□□□ -0.88
SSM4P40318 GCG1YER163C 699 nt9.57□□□□□ -0.88
SSM4P40318 YHR020WYHR020W 2067 nt9.57□□□□□ -0.88
SSM4P40318 OSW2YLR054C 2175 nt9.57□□□□□ -0.88
SSM4P40318 YDL177CYDL177C 513 nt9.56□□□□□ -0.88
SSM4P40318 SWD1YAR003W 1281 nt9.56□□□□□ -0.88
SSM4P40318 PMA2YPL036W 2844 nt9.56□□□□□ -0.88
SSM4P40318 YMR034CYMR034C 1305 nt9.56□□□□□ -0.88
SSM4P40318 YDR187CYDR187C 519 nt9.56□□□□□ -0.88
SSM4P40318 IRC11YOR013W 471 nt9.56□□□□□ -0.88
SSM4P40318 DRE2YKR071C 1047 nt9.55□□□□□ -0.88
SSM4P40318 CCT3YJL014W 1605 nt9.54□□□□□ -0.88
SSM4P40318 RDN5-2RDN5-2 119 nt9.54□□□□□ -0.88
SSM4P40318 RDN5-3RDN5-3 119 nt9.54□□□□□ -0.88
SSM4P40318 RDN5-4RDN5-4 119 nt9.54□□□□□ -0.88
SSM4P40318 RDN5-5RDN5-5 119 nt9.54□□□□□ -0.88
SSM4P40318 CUE4YML101C 354 nt9.54□□□□□ -0.88
SSM4P40318 YBR241CYBR241C 1467 nt9.53□□□□□ -0.88
SSM4P40318 MAM3YOL060C 2121 nt9.53□□□□□ -0.88
SSM4P40318 AQR1YNL065W 1761 nt9.53□□□□□ -0.88
SSM4P40318 PPM2YOL141W 2088 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)BtG(GCC)B 71 nt9.53□□□□□ -0.88
SSM4P40318 SUF16tG(GCC)C 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)D1tG(GCC)D1 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)D2tG(GCC)D2 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)EtG(GCC)E 71 nt9.53□□□□□ -0.88
SSM4P40318 SUF20tG(GCC)F1 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)F2tG(GCC)F2 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)G1tG(GCC)G1 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)G2tG(GCC)G2 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)J1tG(GCC)J1 71 nt9.53□□□□□ -0.88
SSM4P40318 SUF23tG(GCC)J2 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)MtG(GCC)M 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)O1tG(GCC)O1 71 nt9.53□□□□□ -0.88
SSM4P40318 SUF17tG(GCC)O2 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)P1tG(GCC)P1 71 nt9.53□□□□□ -0.88
SSM4P40318 tG(GCC)P2tG(GCC)P2 71 nt9.53□□□□□ -0.88
SSM4P40318 YFL013W-AYFL013W-A 804 nt9.53□□□□□ -0.88
SSM4P40318 YRB2YIL063C 984 nt9.52□□□□□ -0.89
SSM4P40318 POR2YIL114C 846 nt9.52□□□□□ -0.89
SSM4P40318 IMD1YAR073W 1212 nt9.52□□□□□ -0.89
SSM4P40318 RNH1YMR234W 1047 nt9.52□□□□□ -0.89
SSM4P40318 NME1NME1 340 nt9.52□□□□□ -0.89
SSM4P40318 CDC1YDR182W 1476 nt9.51□□□□□ -0.89
SSM4P40318 MHT1YLL062C 975 nt9.51□□□□□ -0.89
SSM4P40318 YHR213W-BYHR213W-B 300 nt9.5□□□□□ -0.89
SSM4P40318 YAR064WYAR064W 300 nt9.5□□□□□ -0.89
SSM4P40318 ARC35YNR035C 1029 nt9.5□□□□□ -0.89
SSM4P40318 TMA46YOR091W 1038 nt9.5□□□□□ -0.89
SSM4P40318 DYS1YHR068W 1164 nt9.49□□□□□ -0.89
SSM4P40318 SLA2YNL243W 2907 nt9.49□□□□□ -0.89
SSM4P40318 HBN1YCL026C-B 582 nt9.49□□□□□ -0.89
SSM4P40318 MIP1YOR330C 3765 nt9.49□□□□□ -0.89
SSM4P40318 GPH1YPR160W 2709 nt9.48□□□□□ -0.89
SSM4P40318 OM45YIL136W 1182 nt9.48□□□□□ -0.89
SSM4P40318 YPL136WYPL136W 369 nt9.48□□□□□ -0.89
SSM4P40318 GSH1YJL101C 2037 nt9.47□□□□□ -0.89
SSM4P40318 YEL075W-AYEL075W-A 612 nt9.47□□□□□ -0.89
SSM4P40318 YLR463CYLR463C 552 nt9.47□□□□□ -0.89
SSM4P40318 TAE1YBR261C 699 nt9.47□□□□□ -0.89
SSM4P40318 ERG8YMR220W 1356 nt9.47□□□□□ -0.89
SSM4P40318 ADE2YOR128C 1716 nt9.47□□□□□ -0.89
SSM4P40318 YDR510C-AYDR510C-A 117 nt9.46□□□□□ -0.9
SSM4P40318 PAC10YGR078C 600 nt9.46□□□□□ -0.9
SSM4P40318 PEX31YGR004W 1389 nt9.46□□□□□ -0.9
SSM4P40318 HHY1YEL059W 309 nt9.45□□□□□ -0.9
SSM4P40318 YBR027CYBR027C 333 nt9.45□□□□□ -0.9
SSM4P40318 GNP1YDR508C 1992 nt9.45□□□□□ -0.9
SSM4P40318 CCT8YJL008C 1707 nt9.45□□□□□ -0.9
SSM4P40318 MCH2YKL221W 1422 nt9.44□□□□□ -0.9
SSM4P40318 CYB2YML054C 1776 nt9.43□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms