Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IghmP01872 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IghmP01872 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IghmP01872 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IghmP01872 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IghmP01872 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.15■□□□□ 0.98
IghmP01872 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
IghmP01872 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.14■□□□□ 0.97
IghmP01872 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.14■□□□□ 0.97
IghmP01872 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IghmP01872 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.14■□□□□ 0.97
IghmP01872 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
IghmP01872 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
IghmP01872 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IghmP01872 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IghmP01872 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IghmP01872 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IghmP01872 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
IghmP01872 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
IghmP01872 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IghmP01872 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IghmP01872 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
IghmP01872 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
IghmP01872 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IghmP01872 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.11■□□□□ 0.97
IghmP01872 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
IghmP01872 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IghmP01872 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IghmP01872 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.1■□□□□ 0.97
IghmP01872 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
IghmP01872 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IghmP01872 Gm4799-201ENSMUST00000095396 657 ntBASIC21.1■□□□□ 0.97
IghmP01872 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IghmP01872 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IghmP01872 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
IghmP01872 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.09■□□□□ 0.97
IghmP01872 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IghmP01872 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IghmP01872 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
IghmP01872 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
IghmP01872 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IghmP01872 Gm9812-201ENSMUST00000061934 968 ntBASIC21.08■□□□□ 0.97
IghmP01872 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IghmP01872 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IghmP01872 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IghmP01872 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
IghmP01872 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
IghmP01872 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
IghmP01872 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IghmP01872 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IghmP01872 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IghmP01872 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IghmP01872 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.06■□□□□ 0.96
IghmP01872 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
IghmP01872 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.06■□□□□ 0.96
IghmP01872 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.05■□□□□ 0.96
IghmP01872 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IghmP01872 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
IghmP01872 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IghmP01872 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
IghmP01872 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
IghmP01872 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
IghmP01872 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
IghmP01872 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IghmP01872 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IghmP01872 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.04■□□□□ 0.96
IghmP01872 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.04■□□□□ 0.96
IghmP01872 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IghmP01872 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IghmP01872 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
IghmP01872 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.03■□□□□ 0.96
IghmP01872 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
IghmP01872 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
IghmP01872 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IghmP01872 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IghmP01872 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IghmP01872 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.03■□□□□ 0.96
IghmP01872 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IghmP01872 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IghmP01872 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
IghmP01872 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
IghmP01872 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.02■□□□□ 0.96
IghmP01872 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.02■□□□□ 0.96
IghmP01872 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IghmP01872 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
IghmP01872 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
IghmP01872 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IghmP01872 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
IghmP01872 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.02■□□□□ 0.95
IghmP01872 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IghmP01872 Mir3960-201ENSMUST00000198213 73 ntBASIC21.01■□□□□ 0.95
IghmP01872 Gm7432-201ENSMUST00000210343 879 ntBASIC21.01■□□□□ 0.95
IghmP01872 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.01■□□□□ 0.95
IghmP01872 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IghmP01872 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IghmP01872 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.01■□□□□ 0.95
IghmP01872 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
IghmP01872 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IghmP01872 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.01■□□□□ 0.95
IghmP01872 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms