Protein–RNA interactions for Protein: O88576

Slc6a18, Sodium-dependent neutral amino acid transporter B(0)AT3, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a18O88576 Gm44428-201ENSMUST00000204474 874 ntBASIC21.3■■□□□ 1
Slc6a18O88576 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Slc6a18O88576 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a18O88576 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.29■■□□□ 1
Slc6a18O88576 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Slc6a18O88576 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.29■■□□□ 1
Slc6a18O88576 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a18O88576 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a18O88576 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Slc6a18O88576 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a18O88576 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a18O88576 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a18O88576 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a18O88576 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a18O88576 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc6a18O88576 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc6a18O88576 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc6a18O88576 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.27■■□□□ 1
Slc6a18O88576 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc6a18O88576 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.27■■□□□ 1
Slc6a18O88576 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a18O88576 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Slc6a18O88576 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a18O88576 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a18O88576 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Slc6a18O88576 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Slc6a18O88576 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a18O88576 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.25■□□□□ 0.99
Slc6a18O88576 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a18O88576 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a18O88576 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Slc6a18O88576 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a18O88576 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a18O88576 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.23■□□□□ 0.99
Slc6a18O88576 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a18O88576 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a18O88576 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a18O88576 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a18O88576 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a18O88576 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Slc6a18O88576 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a18O88576 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a18O88576 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a18O88576 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a18O88576 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a18O88576 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Slc6a18O88576 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a18O88576 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.21■□□□□ 0.99
Slc6a18O88576 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Slc6a18O88576 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a18O88576 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Slc6a18O88576 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a18O88576 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Slc6a18O88576 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Slc6a18O88576 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a18O88576 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a18O88576 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a18O88576 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a18O88576 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a18O88576 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a18O88576 Gm5921-201ENSMUST00000075898 882 ntBASIC21.18■□□□□ 0.98
Slc6a18O88576 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a18O88576 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.17■□□□□ 0.98
Slc6a18O88576 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.17■□□□□ 0.98
Slc6a18O88576 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Slc6a18O88576 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.16■□□□□ 0.98
Slc6a18O88576 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.15■□□□□ 0.98
Slc6a18O88576 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a18O88576 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Slc6a18O88576 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a18O88576 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Slc6a18O88576 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a18O88576 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.14■□□□□ 0.97
Slc6a18O88576 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a18O88576 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a18O88576 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.14■□□□□ 0.97
Slc6a18O88576 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a18O88576 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Slc6a18O88576 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a18O88576 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a18O88576 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Slc6a18O88576 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a18O88576 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a18O88576 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a18O88576 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a18O88576 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a18O88576 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a18O88576 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a18O88576 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.1■□□□□ 0.97
Slc6a18O88576 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a18O88576 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a18O88576 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a18O88576 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a18O88576 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a18O88576 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a18O88576 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Slc6a18O88576 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a18O88576 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a18O88576 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a18O88576 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms