Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3854A0A1B0GSS6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3854A0A1B0GSS6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Gm3854A0A1B0GSS6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm3854A0A1B0GSS6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Gm3854A0A1B0GSS6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.75■■□□□ 1.23
Gm3854A0A1B0GSS6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3854A0A1B0GSS6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3854A0A1B0GSS6 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.74■■□□□ 1.23
Gm3854A0A1B0GSS6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Gm3854A0A1B0GSS6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm3854A0A1B0GSS6 Gm13238-201ENSMUST00000117655 780 ntBASIC22.7■■□□□ 1.22
Gm3854A0A1B0GSS6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.7■■□□□ 1.22
Gm3854A0A1B0GSS6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Gm3854A0A1B0GSS6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Gm15820-201ENSMUST00000201566 728 ntBASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3854A0A1B0GSS6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.68■■□□□ 1.22
Gm3854A0A1B0GSS6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Gm3854A0A1B0GSS6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm3854A0A1B0GSS6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3854A0A1B0GSS6 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.66■■□□□ 1.22
Gm3854A0A1B0GSS6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3854A0A1B0GSS6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3854A0A1B0GSS6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Gm43566-201ENSMUST00000196851 808 ntBASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Gm3854A0A1B0GSS6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Gm3854A0A1B0GSS6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Gm3854A0A1B0GSS6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.64■■□□□ 1.21
Gm3854A0A1B0GSS6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Gm3854A0A1B0GSS6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 Gm45444-201ENSMUST00000211394 898 ntBASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm3854A0A1B0GSS6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Gm3854A0A1B0GSS6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Gm3854A0A1B0GSS6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms