Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3854A0A1B0GSS6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3854A0A1B0GSS6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Gm3854A0A1B0GSS6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm3854A0A1B0GSS6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Gm3854A0A1B0GSS6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.75■■□□□ 1.23
Gm3854A0A1B0GSS6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3854A0A1B0GSS6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3854A0A1B0GSS6 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.74■■□□□ 1.23
Gm3854A0A1B0GSS6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Gm3854A0A1B0GSS6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3854A0A1B0GSS6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3854A0A1B0GSS6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.71■■□□□ 1.23
Gm3854A0A1B0GSS6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm3854A0A1B0GSS6 Gm13238-201ENSMUST00000117655 780 ntBASIC22.7■■□□□ 1.22
Gm3854A0A1B0GSS6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.7■■□□□ 1.22
Gm3854A0A1B0GSS6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Gm3854A0A1B0GSS6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Gm15820-201ENSMUST00000201566 728 ntBASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3854A0A1B0GSS6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3854A0A1B0GSS6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.68■■□□□ 1.22
Gm3854A0A1B0GSS6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Gm3854A0A1B0GSS6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm3854A0A1B0GSS6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3854A0A1B0GSS6 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.66■■□□□ 1.22
Gm3854A0A1B0GSS6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3854A0A1B0GSS6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3854A0A1B0GSS6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Gm43566-201ENSMUST00000196851 808 ntBASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3854A0A1B0GSS6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Gm3854A0A1B0GSS6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Gm3854A0A1B0GSS6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Gm3854A0A1B0GSS6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.64■■□□□ 1.21
Gm3854A0A1B0GSS6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Gm3854A0A1B0GSS6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 Gm45444-201ENSMUST00000211394 898 ntBASIC22.63■■□□□ 1.21
Gm3854A0A1B0GSS6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Gm3854A0A1B0GSS6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3854A0A1B0GSS6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.6■■□□□ 1.21
Gm3854A0A1B0GSS6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.59■■□□□ 1.21
Gm3854A0A1B0GSS6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm3854A0A1B0GSS6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Gm3854A0A1B0GSS6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Gm3854A0A1B0GSS6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.57■■□□□ 1.2
Gm3854A0A1B0GSS6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 241.4 ms