Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.31■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.31■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Igkv16-104A0A0B4J1I1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Gm43566-201ENSMUST00000196851 808 ntBASIC23.3■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.3■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.29■■□□□ 1.32
Igkv16-104A0A0B4J1I1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.29■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Igkv16-104A0A0B4J1I1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.26■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Gm45444-201ENSMUST00000211394 898 ntBASIC23.26■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv16-104A0A0B4J1I1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.25■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.24■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Igkv16-104A0A0B4J1I1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.23■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.23■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv16-104A0A0B4J1I1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Igkv16-104A0A0B4J1I1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Igkv16-104A0A0B4J1I1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.2■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv16-104A0A0B4J1I1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.19■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.19■■□□□ 1.3
Igkv16-104A0A0B4J1I1 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.19■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.18■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Gm15820-201ENSMUST00000201566 728 ntBASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.17■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv16-104A0A0B4J1I1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.14■■□□□ 1.3
Igkv16-104A0A0B4J1I1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.14■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.14■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.13■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Igkv16-104A0A0B4J1I1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv16-104A0A0B4J1I1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.12■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.12■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv16-104A0A0B4J1I1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.11■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv16-104A0A0B4J1I1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Rps24-207ENSMUST00000224568 714 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms