Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trbv13-3A0A0B4J1H2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.64■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.64■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv13-3A0A0B4J1H2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.61■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.61■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv13-3A0A0B4J1H2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv13-3A0A0B4J1H2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.58■□□□□ 0.41
Trbv13-3A0A0B4J1H2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.56■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trbv13-3A0A0B4J1H2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.52■□□□□ 0.4
Trbv13-3A0A0B4J1H2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv13-3A0A0B4J1H2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.51■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Gm30023-201ENSMUST00000197970 889 ntBASIC17.51■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms