Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.91■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.9■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Gm43566-201ENSMUST00000196851 808 ntBASIC18.9■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Gm15820-201ENSMUST00000201566 728 ntBASIC18.9■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ighv3-4A0A0A6YXF1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.89■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.88■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.87■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Gm45444-201ENSMUST00000211394 898 ntBASIC18.87■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv3-4A0A0A6YXF1 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.87■□□□□ 0.61
Ighv3-4A0A0A6YXF1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Gm13238-201ENSMUST00000117655 780 ntBASIC18.86■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.86■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.86■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Rps24-207ENSMUST00000224568 714 ntBASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv3-4A0A0A6YXF1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.83■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.81■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.81■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.8■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.78■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ighv3-4A0A0A6YXF1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.77■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv3-4A0A0A6YXF1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ighv3-4A0A0A6YXF1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv3-4A0A0A6YXF1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.75■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.74■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.74■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv3-4A0A0A6YXF1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.73■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Gm45102-201ENSMUST00000207427 857 ntBASIC18.72■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms