Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 AC008550.1-201ENST00000511500 884 ntBASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 KRT18P41-201ENST00000518924 1277 ntBASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 AC073648.6-201ENST00000641589 218 ntBASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 AL138688.1-201ENST00000624851 1594 ntBASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 AC026366.1-201ENST00000488803 879 ntBASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB1Q9Y5G3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 PHGDH-209ENST00000641074 1780 ntBASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGB1Q9Y5G3 Z85996.1-201ENST00000494644 937 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms