Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 AC009947.2-201ENST00000444014 672 ntBASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 NAPSB-206ENST00000562112 1266 ntBASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 AC009065.1-201ENST00000564055 1225 ntBASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 AC024243.1-201ENST00000609234 778 ntBASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.66■□□□□ 0.74
NLRC4Q9NPP4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 ECEL1P2-202ENST00000465689 757 ntBASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 SEC1P-202ENST00000473944 940 ntBASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 AC128688.1-201ENST00000487626 519 ntBASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRC4Q9NPP4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.64■□□□□ 0.74
NLRC4Q9NPP4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
NLRC4Q9NPP4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NLRC4Q9NPP4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
NLRC4Q9NPP4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 MMP23A-201ENST00000234610 1017 ntBASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.64■□□□□ 0.73
NLRC4Q9NPP4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms