Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 CRYGFP-201ENST00000418459 633 ntBASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 RBM17P1-201ENST00000453646 1190 ntBASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 MIR4497-201ENST00000583208 89 ntBASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 AP005242.2-201ENST00000580065 1175 ntBASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTN4IP1Q8WWV3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 AC093827.2-201ENST00000512654 315 ntBASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTN4IP1Q8WWV3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 OR6D1P-203ENST00000641209 4860 ntBASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms