Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 FAM197Y1-201ENST00000421178 764 ntBASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 KRT18P23-201ENST00000435622 1283 ntBASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 WWOX-216ENST00000569818 525 ntBASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 AP001412.1-201ENST00000608405 714 ntBASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPS4Y2Q8TD47 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 AC132938.6-201ENST00000623828 1655 ntBASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 AC009065.1-201ENST00000564055 1225 ntBASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 SLC25A1P4-201ENST00000567977 778 ntBASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPS4Y2Q8TD47 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 LINC00304-203ENST00000565008 1864 ntBASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 AC022211.2-201ENST00000585075 2527 ntBASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 NUDT16P1-203ENST00000513809 620 ntBASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 CD177P1-201ENST00000606252 935 ntBASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms