Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 AC134043.2-201ENST00000624206 2238 ntBASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 AC092597.1-201ENST00000487352 616 ntBASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 AC083849.1-201ENST00000615227 514 ntBASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 AL358472.4-201ENST00000633140 710 ntBASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCC2Q8TAQ2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 FAM86EP-206ENST00000510506 987 ntBASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 ZNF444P1-201ENST00000559497 298 ntBASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCC2Q8TAQ2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 HBZP1-201ENST00000354915 429 ntBASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCC2Q8TAQ2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SMARCC2Q8TAQ2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.2■□□□□ 0.99
SMARCC2Q8TAQ2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 PCED1CP-201ENST00000419887 785 ntBASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 VENTXP5-201ENST00000523979 775 ntBASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 AC091076.1-201ENST00000610741 619 ntBASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCC2Q8TAQ2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms