Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 VENTXP7-201ENST00000475503 772 ntBASIC19.65■□□□□ 0.74
VPS52Q8N1B4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 AL121912.1-201ENST00000603683 238 ntBASIC19.65■□□□□ 0.74
VPS52Q8N1B4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS52Q8N1B4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.64■□□□□ 0.74
VPS52Q8N1B4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS52Q8N1B4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS52Q8N1B4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
VPS52Q8N1B4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 AL022342.1-201ENST00000400363 863 ntBASIC19.64■□□□□ 0.73
VPS52Q8N1B4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 SLC25A6P4-201ENST00000586535 553 ntBASIC19.64■□□□□ 0.73
VPS52Q8N1B4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 AL357033.4-201ENST00000617703 1807 ntBASIC19.64■□□□□ 0.73
VPS52Q8N1B4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS52Q8N1B4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 NSUN5P1-202ENST00000421140 1535 ntBASIC19.63■□□□□ 0.73
VPS52Q8N1B4 NSUN5P2-203ENST00000457352 1529 ntBASIC19.63■□□□□ 0.73
VPS52Q8N1B4 KRT89P-201ENST00000620027 1478 ntBASIC19.63■□□□□ 0.73
VPS52Q8N1B4 KRT8P50-201ENST00000562022 1438 ntBASIC19.63■□□□□ 0.73
VPS52Q8N1B4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 AC079776.4-201ENST00000511039 504 ntBASIC19.63■□□□□ 0.73
VPS52Q8N1B4 AC106795.1-205ENST00000512851 1056 ntBASIC19.63■□□□□ 0.73
VPS52Q8N1B4 AP005901.3-202ENST00000581653 237 ntBASIC19.63■□□□□ 0.73
VPS52Q8N1B4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS52Q8N1B4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 AL662844.1-201ENST00000546340 181 ntBASIC19.62■□□□□ 0.73
VPS52Q8N1B4 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms