Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHC1P78364 AP000525.1-201ENST00000608286 694 ntBASIC17.29■□□□□ 0.36
PHC1P78364 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PHC1P78364 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHC1P78364 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.29■□□□□ 0.36
PHC1P78364 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
PHC1P78364 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PHC1P78364 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHC1P78364 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.29■□□□□ 0.36
PHC1P78364 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.29■□□□□ 0.36
PHC1P78364 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.29■□□□□ 0.36
PHC1P78364 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
PHC1P78364 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHC1P78364 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHC1P78364 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHC1P78364 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.28■□□□□ 0.36
PHC1P78364 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
PHC1P78364 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PHC1P78364 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 PP12613-201ENST00000424958 2230 ntBASIC17.28■□□□□ 0.36
PHC1P78364 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
PHC1P78364 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PHC1P78364 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.28■□□□□ 0.36
PHC1P78364 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.28■□□□□ 0.36
PHC1P78364 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 AC007663.1-201ENST00000438948 1240 ntBASIC17.28■□□□□ 0.36
PHC1P78364 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.28■□□□□ 0.36
PHC1P78364 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.28■□□□□ 0.36
PHC1P78364 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.28■□□□□ 0.36
PHC1P78364 AC104390.1-201ENST00000555663 520 ntBASIC17.28■□□□□ 0.36
PHC1P78364 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.28■□□□□ 0.36
PHC1P78364 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.28■□□□□ 0.36
PHC1P78364 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PHC1P78364 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHC1P78364 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
PHC1P78364 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.27■□□□□ 0.36
PHC1P78364 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PHC1P78364 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHC1P78364 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PHC1P78364 AL645608.8-201ENST00000606034 2086 ntBASIC17.27■□□□□ 0.36
PHC1P78364 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PHC1P78364 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHC1P78364 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHC1P78364 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHC1P78364 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHC1P78364 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.27■□□□□ 0.36
PHC1P78364 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHC1P78364 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.27■□□□□ 0.36
PHC1P78364 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.27■□□□□ 0.36
PHC1P78364 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.27■□□□□ 0.36
PHC1P78364 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PHC1P78364 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHC1P78364 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.27■□□□□ 0.35
PHC1P78364 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PHC1P78364 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHC1P78364 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.26■□□□□ 0.35
PHC1P78364 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
PHC1P78364 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PHC1P78364 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PHC1P78364 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
PHC1P78364 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.26■□□□□ 0.35
PHC1P78364 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHC1P78364 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 INGX-201ENST00000359239 846 ntBASIC17.26■□□□□ 0.35
PHC1P78364 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHC1P78364 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.26■□□□□ 0.35
PHC1P78364 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.26■□□□□ 0.35
PHC1P78364 AC008550.1-201ENST00000511500 884 ntBASIC17.26■□□□□ 0.35
PHC1P78364 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.26■□□□□ 0.35
PHC1P78364 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms