Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.19■□□□□ 0.34
GABREP78334 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.19■□□□□ 0.34
GABREP78334 RPS8P6-201ENST00000426177 609 ntBASIC17.19■□□□□ 0.34
GABREP78334 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 ABCD1P5-201ENST00000445663 754 ntBASIC17.19■□□□□ 0.34
GABREP78334 MTCL1P1-201ENST00000446207 792 ntBASIC17.19■□□□□ 0.34
GABREP78334 KRT18P3-201ENST00000451602 1288 ntBASIC17.19■□□□□ 0.34
GABREP78334 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.19■□□□□ 0.34
GABREP78334 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.19■□□□□ 0.34
GABREP78334 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.19■□□□□ 0.34
GABREP78334 MIR3687-2-201ENST00000577708 61 ntBASIC17.19■□□□□ 0.34
GABREP78334 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 MIR3687-1-201ENST00000614492 61 ntBASIC17.19■□□□□ 0.34
GABREP78334 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.19■□□□□ 0.34
GABREP78334 AC009154.2-201ENST00000621177 724 ntBASIC17.19■□□□□ 0.34
GABREP78334 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 AC099343.3-201ENST00000605834 2503 ntBASIC17.19■□□□□ 0.34
GABREP78334 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.19■□□□□ 0.34
GABREP78334 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.19■□□□□ 0.34
GABREP78334 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
GABREP78334 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.18■□□□□ 0.34
GABREP78334 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 GPX1P2-201ENST00000429271 606 ntBASIC17.18■□□□□ 0.34
GABREP78334 HMGN1P19-201ENST00000436976 333 ntBASIC17.18■□□□□ 0.34
GABREP78334 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.18■□□□□ 0.34
GABREP78334 RNA5SP415-201ENST00000517246 115 ntBASIC17.18■□□□□ 0.34
GABREP78334 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.18■□□□□ 0.34
GABREP78334 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.18■□□□□ 0.34
GABREP78334 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GABREP78334 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
GABREP78334 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.17■□□□□ 0.34
GABREP78334 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
GABREP78334 AC120498.9-201ENST00000339021 3867 ntBASIC17.17■□□□□ 0.34
GABREP78334 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GABREP78334 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 RPSAP43-201ENST00000402237 625 ntBASIC17.17■□□□□ 0.34
GABREP78334 PMS2P2-201ENST00000425039 1128 ntBASIC17.17■□□□□ 0.34
GABREP78334 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.17■□□□□ 0.34
GABREP78334 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.17■□□□□ 0.34
GABREP78334 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.17■□□□□ 0.34
GABREP78334 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 AC012640.2-201ENST00000561606 901 ntBASIC17.17■□□□□ 0.34
GABREP78334 AL355385.1-201ENST00000606123 409 ntBASIC17.17■□□□□ 0.34
GABREP78334 AC083906.6-201ENST00000641366 219 ntBASIC17.17■□□□□ 0.34
GABREP78334 AC079781.4-201ENST00000641908 219 ntBASIC17.17■□□□□ 0.34
GABREP78334 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GABREP78334 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.16■□□□□ 0.34
GABREP78334 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GABREP78334 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.16■□□□□ 0.34
GABREP78334 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 AC125634.1-201ENST00000438758 1403 ntBASIC17.16■□□□□ 0.34
GABREP78334 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.16■□□□□ 0.34
GABREP78334 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.16■□□□□ 0.34
GABREP78334 DNAJB3-201ENST00000446806 729 ntBASIC17.16■□□□□ 0.34
GABREP78334 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms