Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN12P56749 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 CKBP1-201ENST00000565489 1086 ntBASIC15.8■□□□□ 0.12
CLDN12P56749 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 AC008622.2-201ENST00000617006 1229 ntBASIC15.8■□□□□ 0.12
CLDN12P56749 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.8■□□□□ 0.12
CLDN12P56749 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 AP001094.4-201ENST00000579008 2176 ntBASIC15.8■□□□□ 0.12
CLDN12P56749 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN12P56749 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN12P56749 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 KRT8P50-201ENST00000562022 1438 ntBASIC15.79■□□□□ 0.12
CLDN12P56749 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDN12P56749 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN12P56749 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN12P56749 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 AP000593.1-201ENST00000393668 712 ntBASIC15.79■□□□□ 0.12
CLDN12P56749 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN12P56749 NIFKP9-201ENST00000419265 221 ntBASIC15.79■□□□□ 0.12
CLDN12P56749 KRT17P3-201ENST00000420566 1262 ntBASIC15.79■□□□□ 0.12
CLDN12P56749 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLDN12P56749 AC008040.2-201ENST00000461049 708 ntBASIC15.79■□□□□ 0.12
CLDN12P56749 RPS2P4-201ENST00000476944 856 ntBASIC15.79■□□□□ 0.12
CLDN12P56749 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN12P56749 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN12P56749 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDN12P56749 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 AL023806.1-201ENST00000603994 1649 ntBASIC15.79■□□□□ 0.12
CLDN12P56749 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN12P56749 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN12P56749 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN12P56749 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN12P56749 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN12P56749 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
CLDN12P56749 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLDN12P56749 MIR564-202ENST00000385049 94 ntBASIC15.78■□□□□ 0.12
CLDN12P56749 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.78■□□□□ 0.12
CLDN12P56749 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN12P56749 AP003097.1-201ENST00000530657 1135 ntBASIC15.78■□□□□ 0.12
CLDN12P56749 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.78■□□□□ 0.12
CLDN12P56749 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN12P56749 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN12P56749 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 AC011298.2-201ENST00000617989 482 ntBASIC15.78■□□□□ 0.12
CLDN12P56749 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN12P56749 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 OR6D1P-203ENST00000641209 4860 ntBASIC15.78■□□□□ 0.12
CLDN12P56749 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLDN12P56749 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN12P56749 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN12P56749 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms