Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIK1P39086 MINOS1P3-201ENST00000457048 203 ntBASIC19.07■□□□□ 0.64
GRIK1P39086 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.07■□□□□ 0.64
GRIK1P39086 AP005901.3-202ENST00000581653 237 ntBASIC19.07■□□□□ 0.64
GRIK1P39086 AC138894.3-201ENST00000603787 634 ntBASIC19.07■□□□□ 0.64
GRIK1P39086 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GRIK1P39086 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GRIK1P39086 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GRIK1P39086 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.07■□□□□ 0.64
GRIK1P39086 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.07■□□□□ 0.64
GRIK1P39086 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIK1P39086 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.07■□□□□ 0.64
GRIK1P39086 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
GRIK1P39086 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
GRIK1P39086 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.06■□□□□ 0.64
GRIK1P39086 NSUN5P1-202ENST00000421140 1535 ntBASIC19.06■□□□□ 0.64
GRIK1P39086 NSUN5P2-203ENST00000457352 1529 ntBASIC19.06■□□□□ 0.64
GRIK1P39086 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.06■□□□□ 0.64
GRIK1P39086 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.06■□□□□ 0.64
GRIK1P39086 AL121894.2-201ENST00000602977 491 ntBASIC19.06■□□□□ 0.64
GRIK1P39086 AL121772.3-201ENST00000610840 674 ntBASIC19.06■□□□□ 0.64
GRIK1P39086 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.06■□□□□ 0.64
GRIK1P39086 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 AL691432.3-201ENST00000621860 400 ntBASIC19.06■□□□□ 0.64
GRIK1P39086 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.06■□□□□ 0.64
GRIK1P39086 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
GRIK1P39086 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIK1P39086 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.05■□□□□ 0.64
GRIK1P39086 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.05■□□□□ 0.64
GRIK1P39086 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
GRIK1P39086 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
GRIK1P39086 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
GRIK1P39086 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.05■□□□□ 0.64
GRIK1P39086 KRT18P65-201ENST00000439811 1286 ntBASIC19.05■□□□□ 0.64
GRIK1P39086 MTCL1P1-201ENST00000446207 792 ntBASIC19.05■□□□□ 0.64
GRIK1P39086 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.05■□□□□ 0.64
GRIK1P39086 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.05■□□□□ 0.64
GRIK1P39086 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
GRIK1P39086 PHGDH-209ENST00000641074 1780 ntBASIC19.05■□□□□ 0.64
GRIK1P39086 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.05■□□□□ 0.64
GRIK1P39086 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.05■□□□□ 0.64
GRIK1P39086 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GRIK1P39086 AL138781.2-201ENST00000617896 1843 ntBASIC19.04■□□□□ 0.64
GRIK1P39086 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.04■□□□□ 0.64
GRIK1P39086 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GRIK1P39086 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GRIK1P39086 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GRIK1P39086 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GRIK1P39086 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
GRIK1P39086 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GRIK1P39086 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GRIK1P39086 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
GRIK1P39086 AC091304.2-201ENST00000564639 760 ntBASIC19.04■□□□□ 0.64
GRIK1P39086 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.04■□□□□ 0.64
GRIK1P39086 AL732292.2-201ENST00000609649 430 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms