Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Ccl1P10146 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ccl1P10146 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccl1P10146 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccl1P10146 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccl1P10146 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccl1P10146 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccl1P10146 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ccl1P10146 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccl1P10146 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl1P10146 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccl1P10146 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.82□□□□□ -0.52
Ccl1P10146 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccl1P10146 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccl1P10146 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccl1P10146 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccl1P10146 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Gm7370-201ENSMUST00000219471 767 ntBASIC11.82□□□□□ -0.52
Ccl1P10146 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccl1P10146 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl1P10146 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.82□□□□□ -0.52
Ccl1P10146 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccl1P10146 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl1P10146 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccl1P10146 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl1P10146 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl1P10146 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccl1P10146 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl1P10146 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.81□□□□□ -0.52
Ccl1P10146 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.81□□□□□ -0.52
Ccl1P10146 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms