Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TPM3P06753 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM3P06753 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
TPM3P06753 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TPM3P06753 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM3P06753 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM3P06753 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TPM3P06753 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TPM3P06753 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TPM3P06753 AL096828.2-201ENST00000567259 1965 ntBASIC20.35■□□□□ 0.85
TPM3P06753 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TPM3P06753 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
TPM3P06753 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TPM3P06753 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.35■□□□□ 0.85
TPM3P06753 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.35■□□□□ 0.85
TPM3P06753 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.35■□□□□ 0.85
TPM3P06753 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.35■□□□□ 0.85
TPM3P06753 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
TPM3P06753 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TPM3P06753 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TPM3P06753 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM3P06753 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
TPM3P06753 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM3P06753 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
TPM3P06753 AC239809.2-201ENST00000415381 517 ntBASIC20.34■□□□□ 0.85
TPM3P06753 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.34■□□□□ 0.85
TPM3P06753 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 AC069544.1-201ENST00000609399 999 ntBASIC20.34■□□□□ 0.85
TPM3P06753 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TPM3P06753 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TPM3P06753 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.34■□□□□ 0.85
TPM3P06753 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TPM3P06753 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TPM3P06753 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.34■□□□□ 0.85
TPM3P06753 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM3P06753 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM3P06753 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TPM3P06753 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
TPM3P06753 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TPM3P06753 GMCL1P1-201ENST00000463439 1581 ntBASIC20.34■□□□□ 0.85
TPM3P06753 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM3P06753 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.33■□□□□ 0.85
TPM3P06753 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.33■□□□□ 0.85
TPM3P06753 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 AL109659.2-201ENST00000606809 1674 ntBASIC20.33■□□□□ 0.85
TPM3P06753 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM3P06753 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TPM3P06753 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.33■□□□□ 0.85
TPM3P06753 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.33■□□□□ 0.85
TPM3P06753 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.33■□□□□ 0.85
TPM3P06753 AL109923.1-201ENST00000618799 583 ntBASIC20.33■□□□□ 0.85
TPM3P06753 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.33■□□□□ 0.85
TPM3P06753 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.33■□□□□ 0.84
TPM3P06753 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TPM3P06753 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.33■□□□□ 0.84
TPM3P06753 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.33■□□□□ 0.84
TPM3P06753 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TPM3P06753 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
TPM3P06753 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TPM3P06753 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms