Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.57■□□□□ 0.88
ALDH1A1P00352 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.57■□□□□ 0.88
ALDH1A1P00352 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.57■□□□□ 0.88
ALDH1A1P00352 AC103564.2-201ENST00000432853 1299 ntBASIC20.57■□□□□ 0.88
ALDH1A1P00352 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ALDH1A1P00352 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.57■□□□□ 0.88
ALDH1A1P00352 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.57■□□□□ 0.88
ALDH1A1P00352 AC007375.3-201ENST00000600936 2314 ntBASIC20.57■□□□□ 0.88
ALDH1A1P00352 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.57■□□□□ 0.88
ALDH1A1P00352 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A1P00352 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 AC112907.3-201ENST00000577781 2400 ntBASIC20.56■□□□□ 0.88
ALDH1A1P00352 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 ELK2BP-201ENST00000415014 1224 ntBASIC20.56■□□□□ 0.88
ALDH1A1P00352 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 AC190387.1-201ENST00000551683 408 ntBASIC20.56■□□□□ 0.88
ALDH1A1P00352 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 AC004835.2-201ENST00000603762 682 ntBASIC20.56■□□□□ 0.88
ALDH1A1P00352 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 AC093512.1-201ENST00000617969 520 ntBASIC20.56■□□□□ 0.88
ALDH1A1P00352 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A1P00352 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.56■□□□□ 0.88
ALDH1A1P00352 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 AC006504.4-201ENST00000592118 1568 ntBASIC20.55■□□□□ 0.88
ALDH1A1P00352 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 AL139400.1-201ENST00000366220 510 ntBASIC20.55■□□□□ 0.88
ALDH1A1P00352 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 AC096633.1-201ENST00000422446 749 ntBASIC20.55■□□□□ 0.88
ALDH1A1P00352 AL020989.1-201ENST00000422979 469 ntBASIC20.55■□□□□ 0.88
ALDH1A1P00352 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 AC025678.2-201ENST00000562061 970 ntBASIC20.55■□□□□ 0.88
ALDH1A1P00352 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 AC138761.1-201ENST00000584393 385 ntBASIC20.55■□□□□ 0.88
ALDH1A1P00352 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 LINC01126-201ENST00000623515 1646 ntBASIC20.55■□□□□ 0.88
ALDH1A1P00352 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A1P00352 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A1P00352 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 RPS15P9-201ENST00000494093 319 ntBASIC20.54■□□□□ 0.88
ALDH1A1P00352 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms