Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.79■□□□□ 0.44
ITM2AO43736 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.79■□□□□ 0.44
ITM2AO43736 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ITM2AO43736 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ITM2AO43736 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 AC011676.5-201ENST00000624864 2660 ntBASIC17.79■□□□□ 0.44
ITM2AO43736 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ITM2AO43736 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ITM2AO43736 AC100803.2-201ENST00000562459 1963 ntBASIC17.79■□□□□ 0.44
ITM2AO43736 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.79■□□□□ 0.44
ITM2AO43736 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
ITM2AO43736 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ITM2AO43736 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.78■□□□□ 0.44
ITM2AO43736 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ITM2AO43736 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 AL024508.2-201ENST00000607749 1894 ntBASIC17.78■□□□□ 0.44
ITM2AO43736 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ITM2AO43736 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ITM2AO43736 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.78■□□□□ 0.44
ITM2AO43736 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.78■□□□□ 0.44
ITM2AO43736 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.78■□□□□ 0.44
ITM2AO43736 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.78■□□□□ 0.44
ITM2AO43736 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.78■□□□□ 0.44
ITM2AO43736 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITM2AO43736 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ITM2AO43736 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.78■□□□□ 0.44
ITM2AO43736 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
ITM2AO43736 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.77■□□□□ 0.44
ITM2AO43736 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.77■□□□□ 0.44
ITM2AO43736 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ITM2AO43736 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.77■□□□□ 0.44
ITM2AO43736 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.77■□□□□ 0.44
ITM2AO43736 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.77■□□□□ 0.44
ITM2AO43736 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.77■□□□□ 0.44
ITM2AO43736 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.77■□□□□ 0.44
ITM2AO43736 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.77■□□□□ 0.44
ITM2AO43736 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.77■□□□□ 0.44
ITM2AO43736 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.77■□□□□ 0.44
ITM2AO43736 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITM2AO43736 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ITM2AO43736 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ITM2AO43736 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ITM2AO43736 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ITM2AO43736 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.77■□□□□ 0.43
ITM2AO43736 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ITM2AO43736 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ITM2AO43736 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ITM2AO43736 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.76■□□□□ 0.43
ITM2AO43736 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ITM2AO43736 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITM2AO43736 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITM2AO43736 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ITM2AO43736 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.76■□□□□ 0.43
ITM2AO43736 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
ITM2AO43736 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms