Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHA3Q9Y5H8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA3Q9Y5H8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA3Q9Y5H8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA3Q9Y5H8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA3Q9Y5H8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 AC132938.6-201ENST00000623828 1655 ntBASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 KRT17P2-201ENST00000300992 1314 ntBASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA3Q9Y5H8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHA3Q9Y5H8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 SNORA78-201ENST00000459373 127 ntBASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHA3Q9Y5H8 SIRPAP1-201ENST00000448467 1770 ntBASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 AC108860.2-201ENST00000562760 2183 ntBASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms