Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 AC142381.4-202ENST00000563973 229 ntBASIC19.18■□□□□ 0.66
AMFRQ9UKV5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 AC113410.3-201ENST00000623366 203 ntBASIC19.18■□□□□ 0.66
AMFRQ9UKV5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AMFRQ9UKV5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 AL355355.2-201ENST00000442321 338 ntBASIC19.17■□□□□ 0.66
AMFRQ9UKV5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 AC009065.1-201ENST00000564055 1225 ntBASIC19.17■□□□□ 0.66
AMFRQ9UKV5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AMFRQ9UKV5 AL645608.8-201ENST00000606034 2086 ntBASIC19.16■□□□□ 0.66
AMFRQ9UKV5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 AP003041.3-201ENST00000527151 707 ntBASIC19.16■□□□□ 0.66
AMFRQ9UKV5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 AP005242.2-201ENST00000580065 1175 ntBASIC19.16■□□□□ 0.66
AMFRQ9UKV5 CR769767.2-201ENST00000622735 460 ntBASIC19.16■□□□□ 0.66
AMFRQ9UKV5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 AC139713.2-201ENST00000641328 2723 ntBASIC19.16■□□□□ 0.66
AMFRQ9UKV5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AMFRQ9UKV5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 AC012618.2-201ENST00000428058 849 ntBASIC19.15■□□□□ 0.66
AMFRQ9UKV5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 UBE2SP1-201ENST00000450587 669 ntBASIC19.15■□□□□ 0.66
AMFRQ9UKV5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AMFRQ9UKV5 AC233702.5-201ENST00000584107 538 ntBASIC19.15■□□□□ 0.66
AMFRQ9UKV5 AL023803.3-201ENST00000615559 522 ntBASIC19.15■□□□□ 0.66
AMFRQ9UKV5 AL049637.2-201ENST00000641778 930 ntBASIC19.15■□□□□ 0.66
AMFRQ9UKV5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms