Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALPK3Q96L96 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALPK3Q96L96 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALPK3Q96L96 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALPK3Q96L96 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALPK3Q96L96 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALPK3Q96L96 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALPK3Q96L96 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALPK3Q96L96 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 AC091812.2-201ENST00000619081 385 ntBASIC19.66■□□□□ 0.74
ALPK3Q96L96 AC004877.2-201ENST00000623941 599 ntBASIC19.66■□□□□ 0.74
ALPK3Q96L96 AL513210.1-201ENST00000629608 234 ntBASIC19.66■□□□□ 0.74
ALPK3Q96L96 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ALPK3Q96L96 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.65■□□□□ 0.74
ALPK3Q96L96 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.65■□□□□ 0.74
ALPK3Q96L96 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ALPK3Q96L96 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.65■□□□□ 0.74
ALPK3Q96L96 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALPK3Q96L96 PMS2P4-201ENST00000412466 1052 ntBASIC19.65■□□□□ 0.74
ALPK3Q96L96 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.65■□□□□ 0.74
ALPK3Q96L96 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALPK3Q96L96 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ALPK3Q96L96 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALPK3Q96L96 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
ALPK3Q96L96 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALPK3Q96L96 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALPK3Q96L96 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.65■□□□□ 0.74
ALPK3Q96L96 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALPK3Q96L96 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ALPK3Q96L96 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.64■□□□□ 0.74
ALPK3Q96L96 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALPK3Q96L96 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ALPK3Q96L96 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALPK3Q96L96 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALPK3Q96L96 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALPK3Q96L96 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALPK3Q96L96 AC236430.1-201ENST00000402231 743 ntBASIC19.64■□□□□ 0.73
ALPK3Q96L96 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ALPK3Q96L96 PRYP5-201ENST00000451909 266 ntBASIC19.64■□□□□ 0.73
ALPK3Q96L96 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ALPK3Q96L96 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.64■□□□□ 0.73
ALPK3Q96L96 MIR4745-201ENST00000577608 62 ntBASIC19.64■□□□□ 0.73
ALPK3Q96L96 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ALPK3Q96L96 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.64■□□□□ 0.73
ALPK3Q96L96 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALPK3Q96L96 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 AC068137.2-201ENST00000605408 478 ntBASIC19.63■□□□□ 0.73
ALPK3Q96L96 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 AC009093.7-201ENST00000623853 1223 ntBASIC19.63■□□□□ 0.73
ALPK3Q96L96 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 HLA-V-201ENST00000429037 534 ntBASIC19.63■□□□□ 0.73
ALPK3Q96L96 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALPK3Q96L96 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 AC093520.2-201ENST00000561830 333 ntBASIC19.63■□□□□ 0.73
ALPK3Q96L96 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.63■□□□□ 0.73
ALPK3Q96L96 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 AC141586.3-201ENST00000562166 1838 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms