Protein–RNA interactions for Protein: Q96L46

CAPNS2, Calpain small subunit 2, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS2Q96L46 TFAMP1-201ENST00000412727 736 ntBASIC20.79■□□□□ 0.92
CAPNS2Q96L46 TSPY16P-201ENST00000449843 468 ntBASIC20.79■□□□□ 0.92
CAPNS2Q96L46 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPNS2Q96L46 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPNS2Q96L46 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPNS2Q96L46 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPNS2Q96L46 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPNS2Q96L46 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPNS2Q96L46 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPNS2Q96L46 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 MIR661-201ENST00000384842 89 ntBASIC20.78■□□□□ 0.92
CAPNS2Q96L46 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 AC022494.1-201ENST00000466044 728 ntBASIC20.78■□□□□ 0.92
CAPNS2Q96L46 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPNS2Q96L46 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.78■□□□□ 0.92
CAPNS2Q96L46 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 BASP1P1-201ENST00000430708 665 ntBASIC20.77■□□□□ 0.92
CAPNS2Q96L46 RHOQP3-201ENST00000437982 621 ntBASIC20.77■□□□□ 0.92
CAPNS2Q96L46 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS2Q96L46 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CAPNS2Q96L46 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CAPNS2Q96L46 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CAPNS2Q96L46 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CAPNS2Q96L46 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CAPNS2Q96L46 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 REXO1L3P-201ENST00000622202 1288 ntBASIC20.75■□□□□ 0.91
CAPNS2Q96L46 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 AL121761.2-201ENST00000598007 1648 ntBASIC20.75■□□□□ 0.91
CAPNS2Q96L46 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS2Q96L46 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS2Q96L46 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS2Q96L46 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS2Q96L46 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPNS2Q96L46 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms