Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 AC011270.2-201ENST00000624293 2550 ntBASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 GMCL1P1-201ENST00000463439 1581 ntBASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP6Q96FZ7 PCDHB19P-201ENST00000570871 2371 ntBASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 KRT18P55-202ENST00000578578 1546 ntBASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 CICP6-201ENST00000457191 2729 ntBASIC18.28■□□□□ 0.52
CHMP6Q96FZ7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms