Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL096828.2-201ENST00000567259 1965 ntBASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 AC010947.1-201ENST00000623454 693 ntBASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 AC133561.5-201ENST00000635547 218 ntBASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 AC124067.4-201ENST00000519691 2379 ntBASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 LINC01568-207ENST00000641790 1380 ntBASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 AC008622.2-201ENST00000617006 1229 ntBASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 KRT18P22-201ENST00000402024 1347 ntBASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 TNRC18P3-201ENST00000441896 2691 ntBASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.93■□□□□ 0.62
CCHCR1Q8TD31 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 KRT8P50-201ENST00000562022 1438 ntBASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 AL353719.1-201ENST00000566847 864 ntBASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCHCR1Q8TD31 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms