Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 AC011506.1-201ENST00000474329 610 ntBASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 ITM2C-210ENST00000620962 501 ntBASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DNAAF1Q8NEP3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 AL109659.2-201ENST00000606809 1674 ntBASIC16■□□□□ 0.15
DNAAF1Q8NEP3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
DNAAF1Q8NEP3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 AL645608.8-201ENST00000606034 2086 ntBASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 FLJ13224-201ENST00000313737 1514 ntBASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 KRT18P41-201ENST00000518924 1277 ntBASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 DGCR10-201ENST00000609839 495 ntBASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
DNAAF1Q8NEP3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms