Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 AP003733.1-201ENST00000491725 852 ntBASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 KRT18P48-201ENST00000434763 852 ntBASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 AC024563.2-201ENST00000603282 481 ntBASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 Z83836.1-201ENST00000624605 1642 ntBASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 AC016734.2-201ENST00000624325 1377 ntBASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.91■□□□□ 0.62
RFWD3Q6PCD5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 TSPY22P-201ENST00000427496 604 ntBASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 AC005332.3-201ENST00000589904 676 ntBASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 AC012313.1-201ENST00000593393 3059 ntBASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RFWD3Q6PCD5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RFWD3Q6PCD5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.89■□□□□ 0.62
RFWD3Q6PCD5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 AC067852.2-201ENST00000590513 2313 ntBASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 BX276092.5-203ENST00000456199 560 ntBASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms