Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 AL662844.1-201ENST00000546340 181 ntBASIC19.16■□□□□ 0.66
VARS2Q5ST30 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 TP73-AS1-207ENST00000624167 988 ntBASIC19.16■□□□□ 0.66
VARS2Q5ST30 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 AC132938.6-201ENST00000623828 1655 ntBASIC19.16■□□□□ 0.66
VARS2Q5ST30 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 AC139530.3-201ENST00000620344 690 ntBASIC19.15■□□□□ 0.66
VARS2Q5ST30 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 AP000974.1-201ENST00000623909 2387 ntBASIC19.15■□□□□ 0.66
VARS2Q5ST30 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.15■□□□□ 0.66
VARS2Q5ST30 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VARS2Q5ST30 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VARS2Q5ST30 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.14■□□□□ 0.66
VARS2Q5ST30 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
VARS2Q5ST30 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.14■□□□□ 0.66
VARS2Q5ST30 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARS2Q5ST30 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARS2Q5ST30 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARS2Q5ST30 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VARS2Q5ST30 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VARS2Q5ST30 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARS2Q5ST30 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARS2Q5ST30 AC073592.3-201ENST00000625118 1834 ntBASIC19.14■□□□□ 0.65
VARS2Q5ST30 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.14■□□□□ 0.65
VARS2Q5ST30 INTS4P1-201ENST00000438455 1935 ntBASIC19.13■□□□□ 0.65
VARS2Q5ST30 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms