Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTC1Q2NKJ3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTC1Q2NKJ3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.39■□□□□ 0.7
CTC1Q2NKJ3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTC1Q2NKJ3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTC1Q2NKJ3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 AC096582.2-201ENST00000510860 516 ntBASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTC1Q2NKJ3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 AC009113.1-201ENST00000570267 2443 ntBASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 LINC02084-201ENST00000606069 1096 ntBASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 AL355385.1-201ENST00000606123 409 ntBASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 AC104581.1-202ENST00000635932 2618 ntBASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTC1Q2NKJ3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 IGHV3-22-201ENST00000520721 359 ntBASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTC1Q2NKJ3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 RPS2P28-201ENST00000314255 741 ntBASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 RBM17P3-201ENST00000417687 1192 ntBASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 UPF3AP3-201ENST00000420996 769 ntBASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 AC140113.2-201ENST00000604370 208 ntBASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 AL139424.1-201ENST00000607572 797 ntBASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms