Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.28■□□□□ 0.84
ASIC1P78348 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.28■□□□□ 0.84
ASIC1P78348 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.28■□□□□ 0.84
ASIC1P78348 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
ASIC1P78348 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
ASIC1P78348 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.28■□□□□ 0.84
ASIC1P78348 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ASIC1P78348 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 AP000997.3-201ENST00000623333 2250 ntBASIC20.28■□□□□ 0.84
ASIC1P78348 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.28■□□□□ 0.84
ASIC1P78348 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.27■□□□□ 0.84
ASIC1P78348 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.27■□□□□ 0.84
ASIC1P78348 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.27■□□□□ 0.84
ASIC1P78348 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.27■□□□□ 0.84
ASIC1P78348 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 COX11P1-201ENST00000489116 835 ntBASIC20.27■□□□□ 0.84
ASIC1P78348 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.27■□□□□ 0.84
ASIC1P78348 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.27■□□□□ 0.84
ASIC1P78348 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.27■□□□□ 0.84
ASIC1P78348 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ASIC1P78348 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ASIC1P78348 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ASIC1P78348 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ASIC1P78348 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ASIC1P78348 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
ASIC1P78348 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ASIC1P78348 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ASIC1P78348 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.27■□□□□ 0.83
ASIC1P78348 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.27■□□□□ 0.83
ASIC1P78348 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ASIC1P78348 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 AC067852.2-201ENST00000590513 2313 ntBASIC20.26■□□□□ 0.83
ASIC1P78348 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.26■□□□□ 0.83
ASIC1P78348 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ASIC1P78348 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.26■□□□□ 0.83
ASIC1P78348 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
ASIC1P78348 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.26■□□□□ 0.83
ASIC1P78348 AC211429.1-201ENST00000415277 523 ntBASIC20.26■□□□□ 0.83
ASIC1P78348 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.26■□□□□ 0.83
ASIC1P78348 AC034232.1-201ENST00000506026 1064 ntBASIC20.26■□□□□ 0.83
ASIC1P78348 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.26■□□□□ 0.83
ASIC1P78348 AL441883.1-201ENST00000566170 1045 ntBASIC20.26■□□□□ 0.83
ASIC1P78348 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ASIC1P78348 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.26■□□□□ 0.83
ASIC1P78348 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.26■□□□□ 0.83
ASIC1P78348 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ASIC1P78348 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.26■□□□□ 0.83
ASIC1P78348 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.26■□□□□ 0.83
ASIC1P78348 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ASIC1P78348 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ASIC1P78348 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 AC005521.1-201ENST00000393351 872 ntBASIC20.25■□□□□ 0.83
ASIC1P78348 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ASIC1P78348 PVRIG2P-201ENST00000435460 978 ntBASIC20.25■□□□□ 0.83
ASIC1P78348 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.25■□□□□ 0.83
ASIC1P78348 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.25■□□□□ 0.83
ASIC1P78348 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.25■□□□□ 0.83
ASIC1P78348 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms