Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC073592.4-201ENST00000623827 446 ntBASIC20.39■□□□□ 0.85
CENPFP49454 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CENPFP49454 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.39■□□□□ 0.85
CENPFP49454 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CENPFP49454 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.38■□□□□ 0.85
CENPFP49454 AJ011932.1-201ENST00000621707 465 ntBASIC20.38■□□□□ 0.85
CENPFP49454 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CENPFP49454 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CENPFP49454 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CENPFP49454 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.38■□□□□ 0.85
CENPFP49454 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.38■□□□□ 0.85
CENPFP49454 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.38■□□□□ 0.85
CENPFP49454 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.38■□□□□ 0.85
CENPFP49454 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.38■□□□□ 0.85
CENPFP49454 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.38■□□□□ 0.85
CENPFP49454 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.38■□□□□ 0.85
CENPFP49454 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.38■□□□□ 0.85
CENPFP49454 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.38■□□□□ 0.85
CENPFP49454 TSEN15P1-201ENST00000423257 515 ntBASIC20.38■□□□□ 0.85
CENPFP49454 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 Z92544.3-201ENST00000624747 417 ntBASIC20.38■□□□□ 0.85
CENPFP49454 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPFP49454 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.37■□□□□ 0.85
CENPFP49454 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CENPFP49454 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 KRT18P41-201ENST00000518924 1277 ntBASIC20.37■□□□□ 0.85
CENPFP49454 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.37■□□□□ 0.85
CENPFP49454 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 AC005034.1-201ENST00000426657 489 ntBASIC20.37■□□□□ 0.85
CENPFP49454 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.37■□□□□ 0.85
CENPFP49454 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.37■□□□□ 0.85
CENPFP49454 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 GPR89P-201ENST00000407924 1495 ntBASIC20.37■□□□□ 0.85
CENPFP49454 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.37■□□□□ 0.85
CENPFP49454 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPFP49454 FEM1AP3-201ENST00000403722 1741 ntBASIC20.36■□□□□ 0.85
CENPFP49454 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.36■□□□□ 0.85
CENPFP49454 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.36■□□□□ 0.85
CENPFP49454 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.36■□□□□ 0.85
CENPFP49454 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CENPFP49454 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.36■□□□□ 0.85
CENPFP49454 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.36■□□□□ 0.85
CENPFP49454 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.36■□□□□ 0.85
CENPFP49454 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.36■□□□□ 0.85
CENPFP49454 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CENPFP49454 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
CENPFP49454 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CENPFP49454 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CENPFP49454 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.36■□□□□ 0.85
CENPFP49454 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.36■□□□□ 0.85
CENPFP49454 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.36■□□□□ 0.85
CENPFP49454 AL390955.2-201ENST00000603032 514 ntBASIC20.36■□□□□ 0.85
CENPFP49454 AC006504.4-201ENST00000592118 1568 ntBASIC20.35■□□□□ 0.85
CENPFP49454 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.35■□□□□ 0.85
CENPFP49454 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPFP49454 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPFP49454 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPFP49454 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CENPFP49454 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CENPFP49454 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.35■□□□□ 0.85
CENPFP49454 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.35■□□□□ 0.85
CENPFP49454 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.35■□□□□ 0.85
CENPFP49454 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CENPFP49454 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.35■□□□□ 0.85
CENPFP49454 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPFP49454 AC079776.2-201ENST00000641154 1609 ntBASIC20.35■□□□□ 0.85
CENPFP49454 AC109322.1-201ENST00000524499 1264 ntBASIC20.35■□□□□ 0.85
CENPFP49454 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.35■□□□□ 0.85
CENPFP49454 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPFP49454 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CENPFP49454 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms