Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL4P13236 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL4P13236 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL4P13236 AC092865.5-201ENST00000545435 363 ntBASIC17.09■□□□□ 0.33
CCL4P13236 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL4P13236 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL4P13236 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCL4P13236 ZNF259P1-201ENST00000407656 1365 ntBASIC17.09■□□□□ 0.33
CCL4P13236 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL4P13236 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL4P13236 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL4P13236 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL4P13236 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCL4P13236 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL4P13236 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL4P13236 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL4P13236 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CCL4P13236 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.08■□□□□ 0.33
CCL4P13236 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL4P13236 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCL4P13236 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL4P13236 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.08■□□□□ 0.33
CCL4P13236 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL4P13236 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CCL4P13236 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL4P13236 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL4P13236 PMS2P7-201ENST00000506558 1336 ntBASIC17.08■□□□□ 0.32
CCL4P13236 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL4P13236 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCL4P13236 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL4P13236 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL4P13236 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL4P13236 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL4P13236 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCL4P13236 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL4P13236 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL4P13236 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL4P13236 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL4P13236 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.08■□□□□ 0.32
CCL4P13236 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL4P13236 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL4P13236 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL4P13236 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL4P13236 AL356309.3-201ENST00000624132 1934 ntBASIC17.08■□□□□ 0.32
CCL4P13236 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL4P13236 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL4P13236 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.07■□□□□ 0.32
CCL4P13236 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CCL4P13236 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL4P13236 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CCL4P13236 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.07■□□□□ 0.32
CCL4P13236 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL4P13236 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.07■□□□□ 0.32
CCL4P13236 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.07■□□□□ 0.32
CCL4P13236 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.07■□□□□ 0.32
CCL4P13236 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.07■□□□□ 0.32
CCL4P13236 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL4P13236 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCL4P13236 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCL4P13236 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL4P13236 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL4P13236 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.06■□□□□ 0.32
CCL4P13236 AC012640.2-201ENST00000561606 901 ntBASIC17.06■□□□□ 0.32
CCL4P13236 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.06■□□□□ 0.32
CCL4P13236 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL4P13236 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL4P13236 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCL4P13236 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL4P13236 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCL4P13236 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL4P13236 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL4P13236 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL4P13236 AC104109.2-201ENST00000602919 1418 ntBASIC17.05■□□□□ 0.32
CCL4P13236 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL4P13236 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL4P13236 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL4P13236 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms