Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL1O75677 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL1O75677 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL1O75677 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL1O75677 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RFPL1O75677 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.24■□□□□ 0.51
RFPL1O75677 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.24■□□□□ 0.51
RFPL1O75677 AC104076.2-201ENST00000448912 469 ntBASIC18.24■□□□□ 0.51
RFPL1O75677 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.24■□□□□ 0.51
RFPL1O75677 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
RFPL1O75677 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
RFPL1O75677 AC036111.1-201ENST00000533973 1582 ntBASIC18.24■□□□□ 0.51
RFPL1O75677 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL1O75677 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFPL1O75677 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RFPL1O75677 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL1O75677 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL1O75677 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL1O75677 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
RFPL1O75677 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.23■□□□□ 0.51
RFPL1O75677 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL1O75677 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL1O75677 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RFPL1O75677 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL1O75677 AC128688.1-201ENST00000487626 519 ntBASIC18.23■□□□□ 0.51
RFPL1O75677 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.23■□□□□ 0.51
RFPL1O75677 AC010203.1-204ENST00000548782 407 ntBASIC18.23■□□□□ 0.51
RFPL1O75677 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.23■□□□□ 0.51
RFPL1O75677 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RFPL1O75677 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL1O75677 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFPL1O75677 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL1O75677 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 AC093010.1-201ENST00000473625 1624 ntBASIC18.23■□□□□ 0.51
RFPL1O75677 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL1O75677 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.23■□□□□ 0.51
RFPL1O75677 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL1O75677 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RFPL1O75677 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.22■□□□□ 0.51
RFPL1O75677 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 AC009102.3-201ENST00000623118 1491 ntBASIC18.22■□□□□ 0.51
RFPL1O75677 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.22■□□□□ 0.51
RFPL1O75677 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 TSPY14P-201ENST00000303979 915 ntBASIC18.22■□□□□ 0.51
RFPL1O75677 MIR149-201ENST00000384879 89 ntBASIC18.22■□□□□ 0.51
RFPL1O75677 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.22■□□□□ 0.51
RFPL1O75677 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RFPL1O75677 MFAP1P1-201ENST00000442257 1255 ntBASIC18.22■□□□□ 0.51
RFPL1O75677 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.22■□□□□ 0.51
RFPL1O75677 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.22■□□□□ 0.51
RFPL1O75677 MIR4674-201ENST00000582457 87 ntBASIC18.22■□□□□ 0.51
RFPL1O75677 MIR3180-5-201ENST00000583743 153 ntBASIC18.22■□□□□ 0.51
RFPL1O75677 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 AC012313.1-201ENST00000593393 3059 ntBASIC18.22■□□□□ 0.51
RFPL1O75677 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RFPL1O75677 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RFPL1O75677 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFPL1O75677 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
RFPL1O75677 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.21■□□□□ 0.51
RFPL1O75677 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RFPL1O75677 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RFPL1O75677 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
RFPL1O75677 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.21■□□□□ 0.51
RFPL1O75677 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.21■□□□□ 0.51
RFPL1O75677 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms