Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD1O14646 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHD1O14646 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC29.19■■■□□ 2.26
CHD1O14646 AC003669.1-201ENST00000334569 611 ntBASIC29.19■■■□□ 2.26
CHD1O14646 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC29.19■■■□□ 2.26
CHD1O14646 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD1O14646 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC29.19■■■□□ 2.26
CHD1O14646 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC29.19■■■□□ 2.26
CHD1O14646 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
CHD1O14646 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC29.18■■■□□ 2.26
CHD1O14646 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD1O14646 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CHD1O14646 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CHD1O14646 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC29.18■■■□□ 2.26
CHD1O14646 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC29.18■■■□□ 2.26
CHD1O14646 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC29.18■■■□□ 2.26
CHD1O14646 IGHV3OR16-6-201ENST00000568775 360 ntBASIC29.18■■■□□ 2.26
CHD1O14646 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD1O14646 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC29.18■■■□□ 2.26
CHD1O14646 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC29.18■■■□□ 2.26
CHD1O14646 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
CHD1O14646 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD1O14646 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD1O14646 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
CHD1O14646 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC29.17■■■□□ 2.26
CHD1O14646 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC29.17■■■□□ 2.26
CHD1O14646 AC022494.1-201ENST00000466044 728 ntBASIC29.17■■■□□ 2.26
CHD1O14646 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CHD1O14646 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
CHD1O14646 AP005018.1-201ENST00000525475 301 ntBASIC29.17■■■□□ 2.26
CHD1O14646 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHD1O14646 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHD1O14646 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC29.17■■■□□ 2.26
CHD1O14646 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC29.17■■■□□ 2.26
CHD1O14646 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHD1O14646 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC29.17■■■□□ 2.26
CHD1O14646 CYB561-217ENST00000582997 877 ntTSL 5 BASIC29.17■■■□□ 2.26
CHD1O14646 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC29.17■■■□□ 2.26
CHD1O14646 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHD1O14646 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC29.17■■■□□ 2.26
CHD1O14646 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC29.16■■■□□ 2.26
CHD1O14646 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC29.16■■■□□ 2.26
CHD1O14646 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC29.16■■■□□ 2.26
CHD1O14646 GRAP-202ENST00000395635 834 ntTSL 2 BASIC29.16■■■□□ 2.26
CHD1O14646 AC096633.1-201ENST00000422446 749 ntBASIC29.16■■■□□ 2.26
CHD1O14646 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC29.16■■■□□ 2.26
CHD1O14646 FAM207CP-201ENST00000443486 507 ntBASIC29.16■■■□□ 2.26
CHD1O14646 OARD1-208ENST00000469104 704 ntTSL 2 BASIC29.16■■■□□ 2.26
CHD1O14646 NAA50-208ENST00000497255 789 ntTSL 5 BASIC29.16■■■□□ 2.26
CHD1O14646 AL606495.2-201ENST00000605867 535 ntBASIC29.16■■■□□ 2.26
CHD1O14646 AC073592.5-201ENST00000624854 528 ntBASIC29.16■■■□□ 2.26
CHD1O14646 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC29.16■■■□□ 2.26
CHD1O14646 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC29.16■■■□□ 2.26
CHD1O14646 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHD1O14646 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
CHD1O14646 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHD1O14646 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC29.15■■■□□ 2.26
CHD1O14646 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHD1O14646 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC29.15■■■□□ 2.26
CHD1O14646 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC29.15■■■□□ 2.26
CHD1O14646 CRB3P1-201ENST00000449338 276 ntBASIC29.15■■■□□ 2.26
CHD1O14646 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC29.15■■■□□ 2.26
CHD1O14646 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC29.15■■■□□ 2.26
CHD1O14646 AC096734.2-201ENST00000562054 433 ntBASIC29.15■■■□□ 2.26
CHD1O14646 OR7E47P-204ENST00000575924 449 ntBASIC29.15■■■□□ 2.26
CHD1O14646 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC29.15■■■□□ 2.26
CHD1O14646 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
CHD1O14646 AC008761.3-201ENST00000624803 892 ntBASIC29.15■■■□□ 2.26
CHD1O14646 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHD1O14646 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CHD1O14646 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHD1O14646 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHD1O14646 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHD1O14646 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
CHD1O14646 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC29.14■■■□□ 2.26
CHD1O14646 TSPY16P-201ENST00000449843 468 ntBASIC29.14■■■□□ 2.26
CHD1O14646 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
CHD1O14646 RNA5SP421-201ENST00000516864 134 ntBASIC29.14■■■□□ 2.26
CHD1O14646 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHD1O14646 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
CHD1O14646 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHD1O14646 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
CHD1O14646 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
CHD1O14646 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC29.14■■■□□ 2.26
CHD1O14646 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHD1O14646 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CHD1O14646 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
CHD1O14646 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
CHD1O14646 TFAMP1-201ENST00000412727 736 ntBASIC29.14■■■□□ 2.25
CHD1O14646 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.25
CHD1O14646 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
CHD1O14646 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
CHD1O14646 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
CHD1O14646 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
CHD1O14646 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.25
CHD1O14646 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC29.14■■■□□ 2.25
CHD1O14646 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHD1O14646 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC29.13■■■□□ 2.25
CHD1O14646 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHD1O14646 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms