Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 AC018712.1-201ENST00000455767 687 ntBASIC20.61■□□□□ 0.89
FBXO40Q9UH90 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 AP001269.4-201ENST00000609611 512 ntBASIC20.61■□□□□ 0.89
FBXO40Q9UH90 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FBXO40Q9UH90 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 IL9RP2-201ENST00000423948 1312 ntBASIC20.6■□□□□ 0.89
FBXO40Q9UH90 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 RNPS1P1-201ENST00000507437 918 ntBASIC20.6■□□□□ 0.89
FBXO40Q9UH90 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.6■□□□□ 0.89
FBXO40Q9UH90 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 AC148477.8-201ENST00000624298 468 ntBASIC20.59■□□□□ 0.89
FBXO40Q9UH90 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO40Q9UH90 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 ABCD1P5-201ENST00000445663 754 ntBASIC20.58■□□□□ 0.89
FBXO40Q9UH90 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.58■□□□□ 0.89
FBXO40Q9UH90 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
FBXO40Q9UH90 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.58■□□□□ 0.88
FBXO40Q9UH90 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO40Q9UH90 AP005117.1-201ENST00000584346 1413 ntBASIC20.58■□□□□ 0.88
FBXO40Q9UH90 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO40Q9UH90 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO40Q9UH90 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
FBXO40Q9UH90 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO40Q9UH90 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FBXO40Q9UH90 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms