Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 CDCA4P2-201ENST00000441182 718 ntBASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 UBALD1-205ENST00000590891 2641 ntBASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 AC046158.3-201ENST00000624947 2558 ntBASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 AC099343.3-201ENST00000605834 2503 ntBASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 AC026185.1-201ENST00000445748 174 ntBASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKAP2Q8WWK9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.06■□□□□ 0.48
CKAP2Q8WWK9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 AC091390.4-202ENST00000476426 537 ntBASIC18.05■□□□□ 0.48
CKAP2Q8WWK9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms