Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 HLA-B-256ENST00000639848 1089 ntBASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM4Q8WVI0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 MIR638-201ENST00000385237 100 ntBASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 ZNRF2P3-201ENST00000424200 374 ntBASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 AF201337.1-201ENST00000520239 748 ntBASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 AC105036.2-201ENST00000569468 176 ntBASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.55■□□□□ 0.08
SMIM4Q8WVI0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 AC105020.1-201ENST00000435356 2205 ntBASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 KRT18P5-201ENST00000436075 1291 ntBASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms